Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- mitochondrion 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G380000.1 | Wheat | cytosol, extracellular | 99.4 | 99.4 |
| TraesCS6B01G434600.1 | Wheat | extracellular | 98.2 | 98.2 |
| HORVU6Hr1G091350.3 | Barley | cytosol, endoplasmic reticulum | 89.82 | 90.36 |
| HORVU6Hr1G091440.1 | Barley | cytosol, endoplasmic reticulum | 89.82 | 90.36 |
| TraesCS2A01G229200.1 | Wheat | endoplasmic reticulum, extracellular | 79.04 | 79.52 |
| Os07t0501700-01 | Rice | cytosol, mitochondrion | 74.85 | 75.3 |
| EER97258 | Sorghum | mitochondrion | 71.86 | 71.86 |
| Zm00001d006447_P001 | Maize | mitochondrion | 70.06 | 70.48 |
| TraesCS2A01G261500.1 | Wheat | cytosol | 49.1 | 50.93 |
| TraesCS5A01G546300.1 | Wheat | cytosol | 49.7 | 49.4 |
| TraesCS2A01G229100.1 | Wheat | cytosol | 49.7 | 49.4 |
| TraesCS2A01G501300.1 | Wheat | mitochondrion | 47.31 | 46.47 |
| TraesCS2A01G261400.1 | Wheat | cytosol | 44.31 | 43.53 |
| TraesCS5A01G169300.1 | Wheat | cytosol | 34.13 | 33.33 |
| TraesCS6A01G160700.1 | Wheat | cytosol | 38.32 | 19.81 |
| TraesCS6A01G285400.2 | Wheat | golgi | 37.13 | 18.67 |
| TraesCS1A01G239200.1 | Wheat | cytosol | 41.92 | 18.67 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G394700.1 | EnsemblPlantsGene:TraesCS6A01G394700 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF321 | PFAM:PF00168 | PFscan:PS50004 | PRINTS:PR00360 |
| SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | TIGR:cd04038 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6A:+:608073356..608074353
Molecular Weight (calculated)
19134.0 Da
IEP (calculated)
5.273
GRAVY (calculated)
-0.330
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLLGLLKV KVVRGLNLAI CDPLSHSSDP YVVIRLGQQK VKSSIKYKTI NPEWNEELTL SITNWTLPVK IEVFDHDTFT KDDTMGDAEF SILDFVEIAV
101: KDLTHVRDDT VMKTFQPNEE NSYSADSHIM WKDGKVTQNM ALKLRNTDTG ELIMHLEWVN LPPGMSR
101: KDLTHVRDDT VMKTFQPNEE NSYSADSHIM WKDGKVTQNM ALKLRNTDTG ELIMHLEWVN LPPGMSR
001: MKPSLMDSLL GLLRIRIKRG VNLAVRDLNS SDPYVVVKMA KQKLKTRVIY KNVNPEWNED LTLSVSDPNL TVLLTVYDYD TFTKDDKMGD AEFGIKPFVN
101: ALKMHLHDLP SGTIVTTVQP SRDNCLAEES RVIWSDGKLV QDIVLRLRHV ECGEVEAQLQ WIDLPGKGL
101: ALKMHLHDLP SGTIVTTVQP SRDNCLAEES RVIWSDGKLV QDIVLRLRHV ECGEVEAQLQ WIDLPGKGL
Arabidopsis Description
CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.