Factsheet for GSMUA_Achr2P13810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00230_001	Banana	cytosol, mitochondrion	73.33	73.33
GSMUA_Achr10P...	Banana	cytosol	69.09	69.09
GSMUA_Achr8P15780_001	Banana	mitochondrion	67.88	67.88
GSMUA_Achr9P25020_001	Banana	cytosol	67.27	67.27
GSMUA_Achr10P...	Banana	cytosol	61.82	62.96
EER97836	Sorghum	cytosol	61.21	61.21
GSMUA_Achr6P07630_001	Banana	cytosol	60.0	59.64
GSMUA_Achr1P08400_001	Banana	cytosol, plasma membrane	66.06	59.56
GSMUA_Achr2P15950_001	Banana	cytosol	61.21	58.38
TraesCS2A01G261500.1	Wheat	cytosol	53.33	54.66
Os07t0108400-01	Rice	cytosol	56.97	54.02
HORVU2Hr1G063790.1	Barley	cytosol	53.33	51.76
TraesCS2D01G262500.1	Wheat	cytosol	51.52	50.0
TraesCS2B01G280800.1	Wheat	cytosol	50.91	49.41
TraesCS2A01G261400.1	Wheat	cytosol	49.7	48.24
GSMUA_Achr4P13040_001	Banana	cytosol	44.24	42.69
Zm00001d018668_P002	Maize	cytosol, extracellular, plastid	54.55	41.47
OQU88318	Sorghum	mitochondrion	54.55	36.0
GSMUA_Achr2P05420_001	Banana	cytosol	30.91	33.77
GSMUA_Achr9P12760_001	Banana	cytosol	44.24	22.19
GSMUA_Achr9P22350_001	Banana	cytosol	44.24	21.92
GSMUA_Achr4P03900_001	Banana	cytosol	41.21	20.54
GSMUA_Achr8P09660_001	Banana	cytosol, plastid	42.42	20.17
GSMUA_Achr5P16180_001	Banana	cytosol	44.24	19.89
GSMUA_Achr9P27900_001	Banana	cytosol	40.61	19.31
Os07t0108500-01	Rice	mitochondrion	16.97	15.3
GSMUA_Achr7P20210_001	Banana	cytosol	15.76	11.56

Protein Annotations

EnsemblPlants:GSMUA_Achr2P13810_001	EnsemblPlants:GSMUA_Achr2T13810_001	EnsemblPlantsGene:GSMUA_Achr2G13810_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000296734B	UniProt:M0S7S2	MapMan:11.1.2.1.2	:

Description

Putative Probable ADP-ribosylation factor GTPase-activating protein AGD11 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13810_001]

Coordinates

chr2:+:15808049..15811027

Molecular Weight (calculated)

18421.1 Da

IEP (calculated)

4.499

GRAVY (calculated)

-0.224

Length

165 amino acids

Sequence
(BLAST)

001: MENVLGLLRV RVQRGVNLAS RDAGGSDAYV VLRMGDQKLK TSVKKNCLNP EWNEDLTLCV TDPIQPLKLE VYDKDTFTPD DIMGDAELDI QPFMDAVKMD
101: LAGIPNVTII TTVRPSRQNC LVDDSHISRK DGSVAQDVVL RLRNVESGEV ELQLLWVNIS RAQDI

Best Arabidopsis Sequence Match ( AT1G48590.1 )
(BLAST)

001: MKPSLMDSLL GLLRIRIKRG VNLAVRDLNS SDPYVVVKMA KQKLKTRVIY KNVNPEWNED LTLSVSDPNL TVLLTVYDYD TFTKDDKMGD AEFGIKPFVN
101: ALKMHLHDLP SGTIVTTVQP SRDNCLAEES RVIWSDGKLV QDIVLRLRHV ECGEVEAQLQ WIDLPGKGL

Arabidopsis Description

CAR5Protein C2-DOMAIN ABA-RELATED 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP65]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.