Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G251800.1 | Wheat | nucleus | 88.97 | 88.97 |
| TraesCS5B01G249800.1 | Wheat | nucleus | 88.26 | 88.26 |
| Os09t0475800-01 | Rice | nucleus | 54.45 | 66.52 |
| TraesCS3D01G271300.1 | Wheat | nucleus | 16.01 | 29.61 |
| TraesCS4D01G080100.1 | Wheat | nucleus | 23.49 | 25.1 |
| TraesCS2D01G563400.1 | Wheat | nucleus | 17.79 | 24.15 |
| TraesCS2D01G563200.1 | Wheat | plastid | 18.86 | 23.98 |
| TraesCS2D01G563100.1 | Wheat | nucleus | 18.15 | 22.67 |
| TraesCS2D01G563000.1 | Wheat | nucleus, plastid | 17.44 | 22.58 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 17.79 | 21.74 |
| TraesCS1D01G336600.1 | Wheat | nucleus, plastid | 15.3 | 20.09 |
| TraesCS3D01G295100.1 | Wheat | nucleus | 14.23 | 20.0 |
| TraesCS4D01G285100.1 | Wheat | nucleus | 21.0 | 13.35 |
| TraesCS2D01G100300.1 | Wheat | mitochondrion, nucleus | 21.0 | 11.78 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 21.71 | 11.34 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 18.15 | 10.71 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G259700.1 | EnsemblPlantsGene:TraesCS5D01G259700 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF67 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr5D:+:365992363..365993539
Molecular Weight (calculated)
28858.8 Da
IEP (calculated)
4.634
GRAVY (calculated)
-0.576
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEPGRRPFA GAVDLRRPKG YPAPSATPQP QAEAGAGDAH GDPCPRCESR DTKFCYYNNY NTSQPRHYCK SCRRYWTKGG TLRNVPVGGG SRKSSSSSSS
101: SSSSPKRAKN SKRRRVAPAA PPEPEAEHDA DASAAAAVAA RTKEAAATTE DVTTADDPAA APAADGCFAF TAGEPDAPPA AEGCFTFLAS ELDAPPAAEG
201: DRGLAFTAAE PDAPPAADGD GGLAFTDHPS VALGLGVADD AGGKELADPS PFEWPSGCDL GSYWVAGVFA DTDPALFLSP P
101: SSSSPKRAKN SKRRRVAPAA PPEPEAEHDA DASAAAAVAA RTKEAAATTE DVTTADDPAA APAADGCFAF TAGEPDAPPA AEGCFTFLAS ELDAPPAAEG
201: DRGLAFTAAE PDAPPAADGD GGLAFTDHPS VALGLGVADD AGGKELADPS PFEWPSGCDL GSYWVAGVFA DTDPALFLSP P
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.