Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G591200.1 | Wheat | nucleus, plastid | 86.18 | 87.38 |
| TraesCS2B01G592700.1 | Wheat | nucleus | 84.79 | 82.88 |
| TraesCS2D01G563100.1 | Wheat | nucleus | 82.95 | 80.0 |
| HORVU2Hr1G119110.3 | Barley | nucleus | 77.88 | 79.34 |
| TraesCS2D01G563400.1 | Wheat | nucleus | 73.73 | 77.29 |
| TraesCS2D01G563200.1 | Wheat | plastid | 76.5 | 75.11 |
| HORVU2Hr1G119160.3 | Barley | nucleus, plastid | 71.89 | 75.0 |
| Zm00001d001824_P001 | Maize | nucleus | 53.92 | 57.35 |
| Os04t0678400-01 | Rice | plastid | 51.15 | 53.88 |
| EES13107 | Sorghum | nucleus | 54.84 | 53.12 |
| Zm00001d026628_P001 | Maize | nucleus, plastid | 50.69 | 52.13 |
| TraesCS3D01G271300.1 | Wheat | nucleus | 18.89 | 26.97 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 27.19 | 25.65 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 27.65 | 25.1 |
| TraesCS3D01G295100.1 | Wheat | nucleus | 20.28 | 22.0 |
| TraesCS1D01G336600.1 | Wheat | nucleus, plastid | 21.2 | 21.5 |
| TraesCS4D01G080100.1 | Wheat | nucleus | 23.5 | 19.39 |
| TraesCS5D01G259700.1 | Wheat | nucleus | 22.58 | 17.44 |
| TraesCS4D01G285100.1 | Wheat | nucleus | 26.27 | 12.9 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 23.96 | 10.92 |
| TraesCS2D01G100300.1 | Wheat | mitochondrion, nucleus | 23.96 | 10.38 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 24.88 | 10.04 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G563000.1 | EnsemblPlantsGene:TraesCS2D01G563000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF31 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr2D:-:634481691..634482439
Molecular Weight (calculated)
23218.8 Da
IEP (calculated)
6.495
GRAVY (calculated)
-0.751
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPASASLLP AASSKRPFAA DQASDADEQE QPLAQEGPVT KKNGDGQSQQ QQPKLECPRC SSTDTKFCYY NNYSTAQPRH YCRTCRRYWT HGGTLRKVPV
101: GGACRRGSGS GKRRRSSAEP HTPSSDSPPP PQQPEQQDAL PPLPVFPFLT DGAVFLPQFD LGLGGFPWTA PTATDHLYDS LAPWGGCDGA LAPSGAWEDF
201: GGLELTWPPP PPPAAGN
101: GGACRRGSGS GKRRRSSAEP HTPSSDSPPP PQQPEQQDAL PPLPVFPFLT DGAVFLPQFD LGLGGFPWTA PTATDHLYDS LAPWGGCDGA LAPSGAWEDF
201: GGLELTWPPP PPPAAGN
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.