Factsheet for TraesCS2A01G591200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G563000.1	Wheat	nucleus, plastid	87.38	86.18
TraesCS2A01G591100.1	Wheat	nucleus, plastid	83.64	84.83
TraesCS2B01G592700.1	Wheat	nucleus	85.05	81.98
HORVU2Hr1G119110.3	Barley	nucleus	79.91	80.28
TraesCS2A01G590700.1	Wheat	nucleus	73.83	78.61
HORVU2Hr1G119160.3	Barley	nucleus, plastid	74.77	76.92
TraesCS2A01G591000.1	Wheat	mitochondrion, nucleus	85.05	73.09
TraesCS2A01G590800.1	Wheat	plastid	74.77	73.06
Zm00001d001824_P001	Maize	nucleus	50.0	52.45
EES13107	Sorghum	nucleus	50.93	48.66
Os04t0678400-01	Rice	plastid	46.26	48.06
Zm00001d026628_P001	Maize	nucleus, plastid	47.2	47.87
TraesCS3A01G271700.1	Wheat	nucleus	19.63	27.1
TraesCS3A01G106500.1	Wheat	nucleus	28.97	26.05
GSMUA_Achr6P29500_001	Banana	nucleus	27.57	24.69
TraesCS3A01G306800.1	Wheat	nucleus	20.56	21.78
TraesCS1A01G334100.1	Wheat	nucleus, plastid	20.56	21.05
TraesCS4A01G234000.1	Wheat	nucleus	24.3	19.55
TraesCS5A01G251800.1	Wheat	nucleus	23.83	18.15
TraesCS4A01G017700.1	Wheat	nucleus	26.64	13.04
TraesCS2A01G100800.1	Wheat	nucleus	24.3	10.86
TraesCS3A01G189600.1	Wheat	nucleus	23.83	10.71
TraesCS3A01G180600.1	Wheat	nucleus	24.77	9.83

Protein Annotations

EnsemblPlants:TraesCS2A01G591200.1	EnsemblPlantsGene:TraesCS2A01G591200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF31	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr2A:+:778914739..778915488

Molecular Weight (calculated)

22812.5 Da

IEP (calculated)

6.491

GRAVY (calculated)

-0.610

Length

214 amino acids

Sequence
(BLAST)

001: MAPASASLLP AAGAKRPFAA DSAPDVAEQE QPLAQEEAVT KKNGQSEQPK LECPRCSSTD TKFCYYNNYS TAQPRHYCRT CRRYWTQGGT LRKVPVGGAC
101: RRGSGSSSKR RRSSAEPHTP SSDSTPPPQP EQQDTVPMLP VFPFLTDGGP VFLPQFDLGL GGFPWTTPAA TDNLYDSLAP WAACDGALAP TGAWEGFGGL
201: ELTWPPSPPP AAGN

Best Arabidopsis Sequence Match ( AT5G60850.1 )
(BLAST)

001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP

Arabidopsis Description

DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.