Factsheet for Zm00001d026628_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001824_P001	Maize	nucleus	73.46	75.98
EES13107	Sorghum	nucleus	79.62	75.0
Os04t0678400-01	Rice	plastid	61.61	63.11
TraesCS2B01G592600.1	Wheat	nucleus	46.92	53.23
TraesCS2A01G590700.1	Wheat	nucleus	48.82	51.24
TraesCS2D01G563000.1	Wheat	nucleus, plastid	52.13	50.69
TraesCS2B01G592900.1	Wheat	nucleus	48.82	49.76
TraesCS2D01G563400.1	Wheat	nucleus	48.34	49.28
TraesCS2B01G592700.1	Wheat	nucleus	51.66	49.1
TraesCS2D01G563200.1	Wheat	plastid	51.18	48.87
TraesCS2A01G591100.1	Wheat	nucleus, plastid	48.82	48.82
TraesCS2B01G592800.1	Wheat	nucleus, plastid	48.82	48.58
HORVU2Hr1G119110.3	Barley	nucleus	48.34	47.89
TraesCS2A01G590800.1	Wheat	plastid	49.29	47.49
TraesCS2A01G591200.1	Wheat	nucleus, plastid	47.87	47.2
TraesCS2D01G563100.1	Wheat	nucleus	48.82	45.78
HORVU2Hr1G119160.3	Barley	nucleus, plastid	44.55	45.19
TraesCS2A01G591000.1	Wheat	mitochondrion, nucleus	51.18	43.37
Zm00001d039482_P001	Maize	nucleus	27.01	24.68
GSMUA_Achr6P29500_001	Banana	nucleus	26.07	23.01
Zm00001d012703_P001	Maize	nucleus	21.8	20.63
Zm00001d010740_P001	Maize	nucleus	19.91	19.81
Zm00001d038693_P001	Maize	nucleus	20.38	18.61
Zm00001d043402_P001	Maize	nucleus	22.75	18.46
Zm00001d031278_P001	Maize	nucleus	20.85	18.33
Zm00001d005970_P001	Maize	nucleus	20.85	18.03
Zm00001d043904_P001	Maize	nucleus	19.43	17.9
Zm00001d024790_P001	Maize	nucleus	20.38	17.55
Zm00001d020837_P001	Maize	nucleus	21.33	16.98
Zm00001d033325_P001	Maize	nucleus, plastid	23.7	15.92
Zm00001d013724_P001	Maize	nucleus	23.7	14.93
Zm00001d027846_P001	Maize	nucleus	24.64	12.04
Zm00001d032999_P001	Maize	nucleus	22.27	10.44
Zm00001d014198_P001	Maize	nucleus	21.33	10.37
Zm00001d022525_P001	Maize	nucleus	25.12	10.29
Zm00001d040455_P001	Maize	nucleus	24.64	10.14
Zm00001d040362_P001	Maize	nucleus	26.07	9.62

Protein Annotations

EntrezGene:100272945	MapMan:15.5.1.5	ProteinID:AQK47289.1	UniProt:B4FRV3	EMBL:BT039841	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF31	UniParc:UPI00017B79AE	EnsemblPlantsGene:Zm00001d026628	EnsemblPlants:Zm00001d026628_P001	EnsemblPlants:Zm00001d026628_T001
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

C2C2-Dof-transcription factor 41Dof zinc finger protein DOF1.6

Coordinates

chr10:-:149177141..149178387

Molecular Weight (calculated)

22452.0 Da

IEP (calculated)

8.377

GRAVY (calculated)

-0.450

Length

211 amino acids

Sequence
(BLAST)

001: MAPAASILSV TAVAGSKRPA ASDAELPLLD LDSSSLHQQQ GDKAGRKGQD QDHHQQQQLE CPRCRSTNTK FCYYNNYSTA QPRHFCRACR RYWTHGGTLR
101: DVPVGGASRR AGGGGKRRRV SSAETSSSSP PVPASLADAC LSDLPSVFPF LSDGSFFPQL DLGAVVLAPP AFSSSWRSVA PDFYDGLAPW GDIAGLDLSW
201: TPPGSASRSP S

Best Arabidopsis Sequence Match ( AT5G66940.1 )
(BLAST)

001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA

Arabidopsis Description

DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.