Factsheet for Zm00001d040455_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00579	Sorghum	nucleus	88.89	89.06
KRH42862	Soybean	nucleus	8.97	58.97
TraesCS3D01G193100.1	Wheat	nucleus	51.27	55.25
TraesCS3A01G189600.1	Wheat	nucleus	50.68	54.62
Os01t0277500-01	Rice	nucleus	52.05	48.19
Bra030124.1-P	Field mustard	nucleus	11.31	47.54
VIT_10s0003g01260.t01	Wine grape	nucleus	14.62	47.17
CDY71347	Canola	nucleus	11.7	45.45
KRH58964	Soybean	nucleus	14.04	43.64
KRH21283	Soybean	nucleus	12.28	42.86
KRH11011	Soybean	nucleus	12.48	41.83
PGSC0003DMT400087458	Potato	nucleus	13.45	41.82
Solyc02g076850.1.1	Tomato	nucleus	13.26	41.72
AT1G29160.1	Thale cress	nucleus	13.84	40.57
CDX99791	Canola	nucleus	13.65	40.46
AT2G34140.1	Thale cress	nucleus	13.26	40.0
CDY50789	Canola	nucleus	13.65	40.0
Bra032292.1-P	Field mustard	nucleus	13.65	40.0
CDY43321	Canola	nucleus	13.45	39.66
CDX90171	Canola	nucleus	13.45	39.66
Bra010848.1-P	Field mustard	nucleus	13.45	39.43
CDY37670	Canola	nucleus	12.87	39.29
Bra021895.1-P	Field mustard	nucleus	12.67	38.69
CDY15647	Canola	nucleus	13.26	38.42
CDY67393	Canola	nucleus	12.67	38.24
VIT_08s0056g01230.t01	Wine grape	nucleus	35.87	37.25
Solyc02g067230.2.1	Tomato	nucleus	32.36	35.55
PGSC0003DMT400064695	Potato	nucleus	32.16	35.48
KRG94921	Soybean	nucleus	30.8	32.71
KRH64974	Soybean	nucleus	29.24	32.54
KRH44749	Soybean	nucleus	27.1	32.03
Zm00001d027846_P001	Maize	nucleus	26.71	31.71
Solyc02g088070.2.1	Tomato	nucleus	28.46	31.6
Zm00001d022525_P001	Maize	nucleus	31.19	31.07
Zm00001d040362_P001	Maize	nucleus	34.5	30.94
KRH13096	Soybean	nucleus, vacuole	27.68	30.47
PGSC0003DMT400003359	Potato	nucleus	28.85	30.39
Zm00001d032999_P001	Maize	nucleus	26.12	29.78
Zm00001d038693_P001	Maize	nucleus	13.26	29.44
Zm00001d012703_P001	Maize	nucleus	12.67	29.15
Zm00001d010740_P001	Maize	nucleus	11.5	27.83
Zm00001d014198_P001	Maize	nucleus	21.25	25.12
Zm00001d026628_P001	Maize	nucleus, plastid	10.14	24.64
Zm00001d043402_P001	Maize	nucleus	12.48	24.62
Zm00001d001824_P001	Maize	nucleus	9.75	24.51
Zm00001d043904_P001	Maize	nucleus	10.92	24.45
Zm00001d031278_P001	Maize	nucleus	9.94	21.25
Zm00001d039482_P001	Maize	nucleus	9.55	21.21
Zm00001d005970_P001	Maize	nucleus	9.94	20.9
Zm00001d024790_P001	Maize	nucleus	9.75	20.41
Zm00001d033325_P001	Maize	nucleus, plastid	12.28	20.06
Zm00001d013724_P001	Maize	nucleus	12.67	19.4
Zm00001d020837_P001	Maize	nucleus	9.94	19.25

Protein Annotations

EntrezGene:103650023	MapMan:15.5.1.5	UniProt:A0A1D6MQV2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
ProteinID:ONM31384.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089
PANTHER:PTHR31089:SF13	UniParc:UPI0004DE7B5B	EnsemblPlantsGene:Zm00001d040455	EnsemblPlants:Zm00001d040455_P001	EnsemblPlants:Zm00001d040455_T001	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

C2C2-Dof-transcription factor 8Cyclic dof factor 2

Coordinates

chr3:+:44149350..44152864

Molecular Weight (calculated)

54995.8 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.547

Length

513 amino acids

Sequence
(BLAST)

001: MAAPGGLDQD CAQDAAIKLF GRSIPVLHSS VFAATAAAAS EVSTKLSNDV RSNDGMPCLP NMSLIVKTNP FPSKSNMKNG LQAISSQHGK MEADSNSEEA
101: KNSLQAIISQ PGKRYDSKSE EAKTESGGSG QEKVLKKPDK ILPCPRCNSM ETKFCYFNNY NVNQPRHFCR NCKRYWTAGG TMRNVPVGSG RRRNKDPSHH
201: HHFTKVCDYT IATNGDVSDA TQRQSVAAKP CLLQGSGKQN ETACKSVSPV SNIKEQNNAD LISLVSGDNK EEKSCASSAV VSGSSENWMP ENTVKKEEDN
301: TSAYGNGVKV PDHKMQPHHA GPVSVFSRNP AAVMATNQCS EDGIHTPGNG TVSPLSLPPL PMVPTPGICA PAVPFPFPLV PAFVSCIPGW PSGLWGAPWP
401: GSSAPTLLSL PPNGLALSGS NSGVLGKHTR VANLQEEQKA EKKFWVPKAL RIDNPEEAAK SSIWASLGIK PDDRIIFKSF QSKDLKNSAT KTPESLQANP
501: AAFSRSQTFQ ERA

Best Arabidopsis Sequence Match ( AT5G39660.3 )
(BLAST)

001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS

Arabidopsis Description

CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.