Factsheet for Bra030124.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15647	Canola	nucleus	98.36	67.8
AT1G29160.1	Thale cress	nucleus	91.8	64.0
Bra032292.1-P	Field mustard	nucleus	90.16	62.86
Bra010848.1-P	Field mustard	nucleus	88.52	61.71
VIT_10s0003g01260.t01	Wine grape	nucleus	68.03	52.2
Bra021895.1-P	Field mustard	nucleus	63.93	46.43
KRH21283	Soybean	nucleus	52.46	43.54
KRH11011	Soybean	nucleus	53.28	42.48
PGSC0003DMT400087458	Potato	nucleus	57.38	42.42
Solyc02g076850.1.1	Tomato	nucleus	56.56	42.33
KRH42862	Soybean	nucleus	27.05	42.31
KRH58964	Soybean	nucleus	56.56	41.82
Bra031269.1-P	Field mustard	nucleus	37.7	24.08
Bra023888.1-P	Field mustard	nucleus	36.89	22.5
Bra001822.1-P	Field mustard	nucleus	37.7	22.44
Bra030423.1-P	Field mustard	nucleus	31.97	21.08
Bra014297.1-P	Field mustard	nucleus	33.61	20.5
Bra036082.1-P	Field mustard	nucleus	36.89	20.27
Bra010082.1-P	Field mustard	nucleus	44.26	20.15
Bra037135.1-P	Field mustard	nucleus	33.61	19.34
Bra015609.1-P	Field mustard	nucleus	35.25	19.28
Bra012119.1-P	Field mustard	nucleus	34.43	19.09
Bra029261.1-P	Field mustard	nucleus	45.08	18.84
Bra030010.1-P	Field mustard	nucleus	36.07	18.72
Bra011800.1-P	Field mustard	nucleus, plastid	36.89	18.59
Bra012901.1-P	Field mustard	nucleus	36.07	18.18
Bra024683.1-P	Field mustard	nucleus	41.8	15.6
Bra016286.1-P	Field mustard	nucleus	40.16	14.63
Bra028437.1-P	Field mustard	nucleus	47.54	14.5
Bra003994.1-P	Field mustard	nucleus	43.44	13.73
Bra018141.1-P	Field mustard	nucleus	47.54	13.58
Bra004396.1-P	Field mustard	nucleus	40.16	13.32
Bra025655.1-P	Field mustard	nucleus	47.54	13.03
TraesCS3A01G189600.1	Wheat	nucleus	46.72	11.97
TraesCS3D01G193100.1	Wheat	nucleus	46.72	11.97
Os01t0277500-01	Rice	nucleus	51.64	11.37
Zm00001d040455_P001	Maize	nucleus	47.54	11.31
EES00579	Sorghum	nucleus	46.72	11.13

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra030124	EnsemblPlants:Bra030124.1	EnsemblPlants:Bra030124.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4EMV4	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31089	PANTHER:PTHR31089:SF14	UniParc:UPI000254109F	InterPro:Znf_Dof	:	:

Description

AT1G29160 (E=8e-066) | Dof-type zinc finger domain-containing protein

Coordinates

chrA07:+:6383116..6383484

Molecular Weight (calculated)

13615.3 Da

IEP (calculated)

9.813

GRAVY (calculated)

-0.548

Length

122 amino acids

Sequence
(BLAST)

001: MAEKRPDKII ACPRCKSMAT KFCYFNNYNV NQPRHFCKGC QRYWTAGGAL RNVPVGAGRR RSKPPGRAGG FSELLGAATG AVDQVELDAL LVEEWRAGAS
101: HGFFRHDYPV KRLRCYTDGQ SC

Best Arabidopsis Sequence Match ( AT1G29160.1 )
(BLAST)

001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC

Arabidopsis Description

DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.