Factsheet for Os01t0277500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G193100.1	Wheat	nucleus	53.43	62.18
TraesCS3A01G189600.1	Wheat	nucleus	53.25	61.97
KRH42862	Soybean	nucleus	7.76	55.13
Zm00001d040455_P001	Maize	nucleus	48.19	52.05
EES00579	Sorghum	nucleus	47.83	51.76
Bra030124.1-P	Field mustard	nucleus	11.37	51.64
CDY71347	Canola	nucleus	11.73	49.24
VIT_10s0003g01260.t01	Wine grape	nucleus	13.9	48.43
Solyc02g076850.1.1	Tomato	nucleus	13.54	46.01
KRH21283	Soybean	nucleus	12.09	45.58
PGSC0003DMT400087458	Potato	nucleus	13.54	45.45
KRH58964	Soybean	nucleus	13.18	44.24
AT1G29160.1	Thale cress	nucleus	13.9	44.0
CDY43321	Canola	nucleus	13.72	43.68
CDX90171	Canola	nucleus	13.72	43.68
CDX99791	Canola	nucleus	13.54	43.35
KRH11011	Soybean	nucleus	11.91	43.14
AT2G34140.1	Thale cress	nucleus	13.18	42.94
CDY50789	Canola	nucleus	13.54	42.86
Bra010848.1-P	Field mustard	nucleus	13.54	42.86
Bra032292.1-P	Field mustard	nucleus	13.54	42.86
CDY15647	Canola	nucleus	13.36	41.81
CDY37670	Canola	nucleus	12.64	41.67
Bra021895.1-P	Field mustard	nucleus	12.45	41.07
CDY67393	Canola	nucleus	12.45	40.59
VIT_08s0056g01230.t01	Wine grape	nucleus	34.66	38.87
PGSC0003DMT400064695	Potato	nucleus	32.49	38.71
Solyc02g067230.2.1	Tomato	nucleus	32.49	38.54
Os10t0406300-01	Rice	nucleus	13.18	37.63
Solyc02g088070.2.1	Tomato	nucleus	29.78	35.71
PGSC0003DMT400003359	Potato	nucleus	30.87	35.11
Os07t0685000-02	Rice	nucleus	29.96	34.87
KRH44749	Soybean	nucleus	26.71	34.1
Os03t0169600-01	Rice	nucleus	26.53	33.41
KRG94921	Soybean	nucleus	28.7	32.92
KRH64974	Soybean	nucleus	27.26	32.75
Os01t0264000-01	Rice	nucleus	28.7	32.06
KRH13096	Soybean	nucleus, vacuole	26.71	31.76
Os01t0758200-01	Rice	nucleus	11.37	29.86
Os04t0678400-01	Rice	plastid	8.66	23.3
Os09t0475800-01	Rice	nucleus	8.3	20.0
Os01t0673700-00	Rice	nucleus	10.29	17.33
Os08t0490100-01	Rice	nucleus	8.48	17.03

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A0P0V139	ProteinID:BAS71563.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
EnsemblPlantsGene:Os01g0277500	EnsemblPlants:Os01t0277500-01	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31089	PANTHER:PTHR31089:SF13	UniParc:UPI000393C2FC	InterPro:Znf_Dof	SEG:seg	:

Description

Dof zinc factor 4, Dof transcription factor 4Zinc finger, Dof-type domain containing protein. (Os01t0277500-01)

Coordinates

chr1:+:9733832..9738224

Molecular Weight (calculated)

60171.2 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.385

Length

554 amino acids

Sequence
(BLAST)

001: CHYSEHNASG RLLLRPVTCH PPPPPPLASS PLVAVVVLRP RRRRRSRCRC RCRWWQRGRD RGAAMAALRQ GDDPAIKLFG RTIPLLLDPP AAAAAAADEV
101: MPNLGNGVKT NNDLPLVSDK LLIVKGIPFC PNNSKKNDLQ GISRPDGRIE IDSMTEDVKT EPDGSVPEKI LKKPDKILPC PRCNSMETKF CYFNNYNVHQ
201: PRHFCRNCQR YWTAGGAMRN VPVGAGRRRN KHVSKYCQAM MTCNNTVAPG DVSDVVHHQV ITHGSSLLPA TLKENETPTE FISEVPPCKS SASILDIGEP
301: NDTDLVPLAS GDNKEEKSCA SSVVVSSCSE NLMPDNAIMK EPNNRSGCCN GVALPFPTGP ALVLPWSLGW NSVALMPATQ CSMQPVLGLK DGIPCPPSWP
401: PQLMVPAPGI CTPVVPIPLV PPLWSCFPGW PNGMWNAQCP GGNTTVLPST APNKISCSGS SSLVLGKHSR EESLQEEEKT RNYLWVPKTL RIDDPAEAAK
501: SSIWATLGIK PDDKGIFKSF QPNVAKNGTA PESPQALQAN PAAFSRSQSF QETT

Best Arabidopsis Sequence Match ( AT5G39660.3 )
(BLAST)

001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS

Arabidopsis Description

CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.