Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15647 | Canola | nucleus | 97.73 | 72.88 |
| AT1G29160.1 | Thale cress | nucleus | 93.18 | 70.29 |
| CDX99791 | Canola | nucleus | 90.91 | 69.36 |
| CDY50789 | Canola | nucleus | 91.67 | 69.14 |
| CDY43321 | Canola | nucleus | 88.64 | 67.24 |
| CDX90171 | Canola | nucleus | 88.64 | 67.24 |
| VIT_10s0003g01260.t01 | Wine grape | nucleus | 63.64 | 52.83 |
| CDY37670 | Canola | nucleus | 65.91 | 51.79 |
| CDY67393 | Canola | nucleus | 65.91 | 51.18 |
| KRH21283 | Soybean | nucleus | 49.24 | 44.22 |
| PGSC0003DMT400087458 | Potato | nucleus | 54.55 | 43.64 |
| KRH42862 | Soybean | nucleus | 25.76 | 43.59 |
| Solyc02g076850.1.1 | Tomato | nucleus | 53.79 | 43.56 |
| KRH11011 | Soybean | nucleus | 50.0 | 43.14 |
| KRH58964 | Soybean | nucleus | 53.79 | 43.03 |
| CDY56923 | Canola | nucleus | 34.85 | 24.73 |
| CDY51457 | Canola | nucleus | 34.85 | 24.08 |
| CDY43923 | Canola | nucleus | 28.79 | 23.6 |
| CDY37299 | Canola | nucleus | 34.09 | 22.5 |
| CDY69021 | Canola | nucleus | 33.33 | 22.34 |
| CDY48879 | Canola | nucleus | 34.85 | 22.33 |
| CDY32420 | Canola | nucleus | 34.85 | 22.33 |
| CDY52953 | Canola | nucleus | 31.82 | 21.65 |
| CDX87836 | Canola | nucleus | 29.55 | 21.43 |
| CDY46544 | Canola | nucleus | 31.82 | 21.0 |
| CDY00286 | Canola | nucleus | 42.42 | 20.51 |
| CDY20892 | Canola | nucleus | 31.82 | 20.39 |
| CDY58082 | Canola | nucleus | 31.82 | 20.39 |
| CDY52832 | Canola | nucleus | 34.09 | 20.27 |
| CDY69084 | Canola | nucleus | 41.67 | 20.07 |
| CDY17783 | Canola | nucleus | 34.09 | 19.65 |
| CDY69244 | Canola | nucleus | 43.18 | 19.52 |
| CDY67518 | Canola | nucleus | 43.18 | 19.52 |
| CDY18628 | Canola | nucleus | 31.06 | 19.34 |
| CDY12790 | Canola | nucleus | 31.82 | 19.18 |
| CDY01450 | Canola | nucleus | 31.82 | 19.09 |
| CDX81350 | Canola | nucleus | 31.82 | 18.75 |
| CDX83127 | Canola | nucleus | 33.33 | 18.72 |
| CDY17009 | Canola | nucleus | 32.58 | 18.7 |
| CDX75689 | Canola | nucleus, plastid | 34.09 | 18.59 |
| CDY54696 | Canola | nucleus | 33.33 | 18.49 |
| CDY02086 | Canola | nucleus | 33.33 | 18.18 |
| CDX69349 | Canola | nucleus, plastid | 33.33 | 18.18 |
| CDY23010 | Canola | nucleus | 33.33 | 17.81 |
| CDY44994 | Canola | nucleus | 34.85 | 17.04 |
| CDY50734 | Canola | nucleus | 32.58 | 15.87 |
| CDY16193 | Canola | nucleus | 38.64 | 15.6 |
| CDY37010 | Canola | nucleus | 43.94 | 14.87 |
| CDY46443 | Canola | nucleus | 37.12 | 14.63 |
| CDY50735 | Canola | extracellular | 39.39 | 14.29 |
| CDX67434 | Canola | nucleus | 45.45 | 14.18 |
| CDX74440 | Canola | nucleus | 45.45 | 14.15 |
| CDY67869 | Canola | nucleus | 40.91 | 14.03 |
| CDY07344 | Canola | nucleus | 40.91 | 13.99 |
| CDX95919 | Canola | nucleus | 38.64 | 13.86 |
| CDY30261 | Canola | nucleus | 45.45 | 13.64 |
| CDY01768 | Canola | nucleus | 37.88 | 13.59 |
| CDY66672 | Canola | nucleus | 43.94 | 13.58 |
| CDY47405 | Canola | nucleus | 43.94 | 13.52 |
| CDY72477 | Canola | nucleus | 37.12 | 13.32 |
| TraesCS3A01G189600.1 | Wheat | nucleus | 45.45 | 12.61 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 45.45 | 12.61 |
| Os01t0277500-01 | Rice | nucleus | 49.24 | 11.73 |
| Zm00001d040455_P001 | Maize | nucleus | 45.45 | 11.7 |
| EES00579 | Sorghum | nucleus | 44.7 | 11.52 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078K0C5 | UniProt:A0A078K0C5 | EnsemblPlants:CDY71347 | ProteinID:CDY71347 | ProteinID:CDY71347.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00014221001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF14 | UniParc:UPI0004EDFEF4 | InterPro:Znf_Dof |
Description
BnaCnng72530DBnaCnng72530D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K0C5]
Coordinates
chrLK045454:-:1964..2705
Molecular Weight (calculated)
14639.4 Da
IEP (calculated)
9.594
GRAVY (calculated)
-0.542
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: AVRSPSSSDL MAEKRPDKII ACPRCKSMET KFCYFNNYNV NQPRHFCKGC QRYWTAGGAL RNVPVGAGRR RSKPPGRAGG FSELLGAATG AVDQVELDAL
101: LVEEWRAAAS HGVFRHDYPV KRLRCYTDGQ SC
101: LVEEWRAAAS HGVFRHDYPV KRLRCYTDGQ SC
001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
Arabidopsis Description
DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.