Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036082.1-P | Field mustard | nucleus | 99.1 | 99.1 |
| CDY17783 | Canola | nucleus | 92.79 | 89.96 |
| CDY54696 | Canola | nucleus | 79.28 | 73.95 |
| CDX83127 | Canola | nucleus | 77.48 | 73.19 |
| CDY02086 | Canola | nucleus | 79.28 | 72.73 |
| CDY23010 | Canola | nucleus | 78.83 | 70.85 |
| AT3G50410.1 | Thale cress | nucleus | 75.23 | 66.01 |
| CDY12790 | Canola | nucleus | 52.7 | 53.42 |
| CDY18628 | Canola | nucleus | 50.45 | 52.83 |
| CDY01450 | Canola | nucleus | 52.25 | 52.73 |
| CDX81350 | Canola | nucleus | 52.25 | 51.79 |
| KRH70017 | Soybean | nucleus | 51.8 | 49.15 |
| KRH08373 | Soybean | nucleus | 50.9 | 47.88 |
| CDY20892 | Canola | nucleus | 36.04 | 38.84 |
| CDY58082 | Canola | nucleus | 35.59 | 38.35 |
| CDY56923 | Canola | nucleus | 31.53 | 37.63 |
| CDY51457 | Canola | nucleus | 31.53 | 36.65 |
| CDY43923 | Canola | nucleus | 26.13 | 36.02 |
| CDX87836 | Canola | nucleus | 28.83 | 35.16 |
| CDY52953 | Canola | nucleus | 30.18 | 34.54 |
| CDY71347 | Canola | nucleus | 20.27 | 34.09 |
| CDY69021 | Canola | nucleus | 30.18 | 34.01 |
| CDY46544 | Canola | nucleus | 30.63 | 34.0 |
| CDY32420 | Canola | nucleus | 31.08 | 33.5 |
| CDY48879 | Canola | nucleus | 31.08 | 33.5 |
| CDY17009 | Canola | nucleus | 34.68 | 33.48 |
| CDY37299 | Canola | nucleus | 29.73 | 33.0 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 33.33 | 32.17 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 32.88 | 31.74 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 32.43 | 30.25 |
| Zm00001d039482_P001 | Maize | nucleus | 31.08 | 29.87 |
| KXG31638 | Sorghum | nucleus | 31.53 | 29.79 |
| CDX99791 | Canola | nucleus | 22.07 | 28.32 |
| CDY50789 | Canola | nucleus | 22.07 | 28.0 |
| CDY15647 | Canola | nucleus | 21.62 | 27.12 |
| CDY43321 | Canola | nucleus | 21.17 | 27.01 |
| CDX90171 | Canola | nucleus | 21.17 | 27.01 |
| CDX69349 | Canola | nucleus, plastid | 27.93 | 25.62 |
| CDY37670 | Canola | nucleus | 19.37 | 25.6 |
| CDY67393 | Canola | nucleus | 19.37 | 25.29 |
| CDX75689 | Canola | nucleus, plastid | 27.03 | 24.79 |
| CDY00286 | Canola | nucleus | 25.68 | 20.88 |
| CDY69084 | Canola | nucleus | 25.68 | 20.8 |
| CDY69244 | Canola | nucleus | 27.03 | 20.55 |
| CDY67518 | Canola | nucleus | 26.13 | 19.86 |
| CDY44994 | Canola | nucleus | 22.97 | 18.89 |
| CDY16193 | Canola | nucleus | 27.03 | 18.35 |
| CDY46443 | Canola | nucleus | 25.23 | 16.72 |
| CDY50734 | Canola | nucleus | 20.27 | 16.61 |
| CDY50735 | Canola | extracellular | 26.58 | 16.21 |
| CDX95919 | Canola | nucleus | 26.13 | 15.76 |
| CDY67869 | Canola | nucleus | 27.03 | 15.58 |
| CDY07344 | Canola | nucleus | 27.03 | 15.54 |
| CDY01768 | Canola | nucleus | 25.68 | 15.49 |
| CDY72477 | Canola | nucleus | 25.68 | 15.49 |
| CDY66672 | Canola | nucleus | 29.73 | 15.46 |
| CDY47405 | Canola | nucleus | 29.73 | 15.38 |
| CDX74440 | Canola | nucleus | 27.03 | 14.15 |
| CDX67434 | Canola | nucleus | 26.13 | 13.71 |
| CDY30261 | Canola | nucleus | 27.03 | 13.64 |
| CDY37010 | Canola | nucleus | 23.87 | 13.59 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IS76 | UniProt:A0A078IS76 | EnsemblPlants:CDY52832 | ProteinID:CDY52832 | ProteinID:CDY52832.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00007977001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0004EE774C | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng11790DBnaAnng11790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS76]
Coordinates
chrLK033135:-:54739..55407
Molecular Weight (calculated)
23906.7 Da
IEP (calculated)
8.594
GRAVY (calculated)
-0.541
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMSDSGEPR QTAMRPHGVI TGLPPTANEQ QEQLPCPRCN STNTKFCYYN NYNFSQPRHF CKSCRRYWTH GGTLRDIPVG GGTRKSAKRS RTCSSSSSGT
101: RTTSVPLPAT PVLFPHSSTS NGVSHTVTAP LENDGKGNAL SLSGNFTSLL NQNNAGSSFD DVSFALGRAV WPFPTVGDSA TTNVPGVAVP YTWQFEGLES
201: SNAGEYFAWP DLSITTPGNS LK
101: RTTSVPLPAT PVLFPHSSTS NGVSHTVTAP LENDGKGNAL SLSGNFTSLL NQNNAGSSFD DVSFALGRAV WPFPTVGDSA TTNVPGVAVP YTWQFEGLES
201: SNAGEYFAWP DLSITTPGNS LK
001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
Arabidopsis Description
DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.