Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46544 | Canola | nucleus | 96.39 | 93.5 |
| Bra014297.1-P | Field mustard | nucleus | 95.88 | 93.0 |
| CDY43923 | Canola | nucleus | 59.79 | 72.05 |
| CDX87836 | Canola | nucleus | 65.98 | 70.33 |
| CDY56923 | Canola | nucleus | 56.7 | 59.14 |
| CDY51457 | Canola | nucleus | 56.19 | 57.07 |
| CDY37299 | Canola | nucleus | 57.73 | 56.0 |
| CDY32420 | Canola | nucleus | 58.76 | 55.34 |
| CDY69021 | Canola | nucleus | 56.19 | 55.33 |
| CDY48879 | Canola | nucleus | 58.25 | 54.85 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 42.78 | 42.35 |
| GSMUA_Achr10P... | Banana | nucleus | 41.75 | 35.53 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 40.72 | 35.27 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 39.18 | 32.48 |
| CDY71347 | Canola | nucleus | 21.65 | 31.82 |
| CDY52832 | Canola | nucleus | 34.54 | 30.18 |
| CDY58082 | Canola | nucleus | 31.44 | 29.61 |
| CDY20892 | Canola | nucleus | 31.44 | 29.61 |
| CDY17783 | Canola | nucleus | 34.54 | 29.26 |
| CDY18628 | Canola | nucleus | 30.93 | 28.3 |
| CDY54696 | Canola | nucleus | 34.54 | 28.15 |
| CDY12790 | Canola | nucleus | 31.44 | 27.85 |
| CDY01450 | Canola | nucleus | 31.44 | 27.73 |
| CDY02086 | Canola | nucleus | 34.54 | 27.69 |
| CDX83127 | Canola | nucleus | 33.51 | 27.66 |
| CDY23010 | Canola | nucleus | 35.05 | 27.53 |
| CDX81350 | Canola | nucleus | 31.44 | 27.23 |
| CDY17009 | Canola | nucleus | 31.44 | 26.52 |
| CDX99791 | Canola | nucleus | 22.16 | 24.86 |
| CDY50789 | Canola | nucleus | 22.16 | 24.57 |
| CDY15647 | Canola | nucleus | 22.16 | 24.29 |
| CDX90171 | Canola | nucleus | 21.65 | 24.14 |
| CDY43321 | Canola | nucleus | 21.65 | 24.14 |
| CDY37670 | Canola | nucleus | 20.62 | 23.81 |
| CDY67393 | Canola | nucleus | 20.62 | 23.53 |
| CDX75689 | Canola | nucleus, plastid | 28.35 | 22.73 |
| CDX69349 | Canola | nucleus, plastid | 27.84 | 22.31 |
| CDY44994 | Canola | nucleus | 24.23 | 17.41 |
| CDY00286 | Canola | nucleus | 24.23 | 17.22 |
| CDY69084 | Canola | nucleus | 24.23 | 17.15 |
| CDY67518 | Canola | nucleus | 25.26 | 16.78 |
| CDY69244 | Canola | nucleus | 24.74 | 16.44 |
| CDY50734 | Canola | nucleus | 20.62 | 14.76 |
| CDY46443 | Canola | nucleus | 24.74 | 14.33 |
| CDY01768 | Canola | nucleus | 26.29 | 13.86 |
| CDX95919 | Canola | nucleus | 26.29 | 13.86 |
| CDY72477 | Canola | nucleus | 26.29 | 13.86 |
| CDY16193 | Canola | nucleus | 23.2 | 13.76 |
| CDY67869 | Canola | nucleus | 26.8 | 13.51 |
| CDY07344 | Canola | nucleus | 26.8 | 13.47 |
| CDY37010 | Canola | nucleus | 26.29 | 13.08 |
| CDY50735 | Canola | extracellular | 24.23 | 12.91 |
| CDX74440 | Canola | nucleus | 27.32 | 12.5 |
| CDX67434 | Canola | nucleus | 26.8 | 12.29 |
| CDY30261 | Canola | nucleus | 27.32 | 12.05 |
| CDY66672 | Canola | nucleus | 26.29 | 11.94 |
| CDY47405 | Canola | nucleus | 26.29 | 11.89 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IVE4 | UniProt:A0A078IVE4 | EnsemblPlants:CDY52953 | ProteinID:CDY52953 | ProteinID:CDY52953.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00008218001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF60 | UniParc:UPI0004EC199E | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g77910DBnaC03g77910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVE4]
Coordinates
chrLK033145:+:56693..57530
Molecular Weight (calculated)
21232.6 Da
IEP (calculated)
8.695
GRAVY (calculated)
-0.913
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEDMTSAAA YYPHQSMIMT AKQQQQPELP EQEQLNCPRC ASPNTKFCYY NNYNLSQPRH FCKNCRRYWT KGGSLRNIPV GGGTRKNSSK RSSVGSSSSS
101: SSSSSPKSKT VAVSDQESRN TGNSGQEMDP TRMLYGLPVG DPSGGSFSSL LVSNMQQIRG VNYETGSGWY PGMELGLGSG IRRNDDAALT DEQN
101: SSSSSPKSKT VAVSDQESRN TGNSGQEMDP TRMLYGLPVG DPSGGSFSSL LVSNMQQIRG VNYETGSGWY PGMELGLGSG IRRNDDAALT DEQN
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.