Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001822.1-P | Field mustard | nucleus | 99.03 | 99.51 |
| CDY32420 | Canola | nucleus | 98.06 | 98.06 |
| CDY37299 | Canola | nucleus | 84.95 | 87.5 |
| CDY51457 | Canola | nucleus | 80.58 | 86.91 |
| CDY69021 | Canola | nucleus | 83.01 | 86.8 |
| CDY56923 | Canola | nucleus | 77.67 | 86.02 |
| AT3G21270.1 | Thale cress | nucleus | 80.1 | 80.88 |
| CDY43923 | Canola | nucleus | 46.6 | 59.63 |
| CDY46544 | Canola | nucleus | 57.77 | 59.5 |
| CDY52953 | Canola | nucleus | 54.85 | 58.25 |
| CDX87836 | Canola | nucleus | 51.46 | 58.24 |
| KRH47156 | Soybean | nucleus | 50.49 | 49.29 |
| KRH09992 | Soybean | nucleus | 50.0 | 48.82 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 45.63 | 47.96 |
| KRH23341 | Soybean | nucleus | 48.54 | 47.17 |
| KRH44186 | Soybean | nucleus | 48.06 | 46.48 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 45.63 | 43.52 |
| GSMUA_Achr10P... | Banana | nucleus | 45.63 | 41.23 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 42.72 | 39.29 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 40.29 | 35.47 |
| CDY71347 | Canola | nucleus | 22.33 | 34.85 |
| CDY52832 | Canola | nucleus | 33.5 | 31.08 |
| CDY20892 | Canola | nucleus | 31.07 | 31.07 |
| CDY58082 | Canola | nucleus | 30.58 | 30.58 |
| CDY17783 | Canola | nucleus | 32.52 | 29.26 |
| CDY54696 | Canola | nucleus | 33.5 | 28.99 |
| CDX83127 | Canola | nucleus | 33.01 | 28.94 |
| CDY18628 | Canola | nucleus | 29.61 | 28.77 |
| CDY02086 | Canola | nucleus | 33.5 | 28.51 |
| CDY12790 | Canola | nucleus | 30.1 | 28.31 |
| CDY01450 | Canola | nucleus | 30.1 | 28.18 |
| CDY37670 | Canola | nucleus | 22.82 | 27.98 |
| CDY23010 | Canola | nucleus | 33.5 | 27.94 |
| CDX81350 | Canola | nucleus | 30.1 | 27.68 |
| CDY67393 | Canola | nucleus | 22.82 | 27.65 |
| CDY17009 | Canola | nucleus | 30.58 | 27.39 |
| CDX99791 | Canola | nucleus | 22.82 | 27.17 |
| CDY15647 | Canola | nucleus | 23.3 | 27.12 |
| CDY50789 | Canola | nucleus | 22.82 | 26.86 |
| CDX90171 | Canola | nucleus | 22.33 | 26.44 |
| CDY43321 | Canola | nucleus | 22.33 | 26.44 |
| CDX69349 | Canola | nucleus, plastid | 28.64 | 24.38 |
| CDX75689 | Canola | nucleus, plastid | 28.64 | 24.38 |
| CDY00286 | Canola | nucleus | 24.27 | 18.32 |
| CDY69084 | Canola | nucleus | 24.27 | 18.25 |
| CDY67518 | Canola | nucleus | 24.76 | 17.47 |
| CDY69244 | Canola | nucleus | 24.76 | 17.47 |
| CDY44994 | Canola | nucleus | 22.82 | 17.41 |
| CDY50734 | Canola | nucleus | 19.9 | 15.13 |
| CDY46443 | Canola | nucleus | 24.27 | 14.93 |
| CDY16193 | Canola | nucleus | 23.3 | 14.68 |
| CDX95919 | Canola | nucleus | 26.21 | 14.67 |
| CDY72477 | Canola | nucleus | 26.21 | 14.67 |
| CDY50735 | Canola | extracellular | 25.73 | 14.56 |
| CDY01768 | Canola | nucleus | 25.73 | 14.4 |
| CDY37010 | Canola | nucleus | 27.18 | 14.36 |
| CDY07344 | Canola | nucleus | 25.73 | 13.73 |
| CDY67869 | Canola | nucleus | 25.24 | 13.51 |
| CDX67434 | Canola | nucleus | 26.7 | 13.0 |
| CDX74440 | Canola | nucleus | 26.7 | 12.97 |
| CDY47405 | Canola | nucleus | 26.21 | 12.59 |
| CDY30261 | Canola | nucleus | 26.7 | 12.5 |
| CDY66672 | Canola | nucleus | 25.73 | 12.41 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IHJ8 | UniProt:A0A078IHJ8 | EnsemblPlants:CDY48879 | ProteinID:CDY48879 | ProteinID:CDY48879.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00091939001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI0004EEC873 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaA03g36180DBnaA03g36180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHJ8]
Coordinates
chrLK032799:+:15586..16584
Molecular Weight (calculated)
22423.4 Da
IEP (calculated)
9.747
GRAVY (calculated)
-0.977
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDPAAYYQS MMAKQLHQQQ KQQQPQFPDQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KSCRRYWTKG GALRNVPVGG GSRKNAKRST SSSTSPSNSH
101: KKAKTPDPDP GSQKETNPDT DPTRMLYGFP IGDQDVKGME MGGGGGGSFS SLLASNMQLG LGGIMLDGSG WDPGMGLGMG LRRSEAGNGG GCSPWTDLAM
201: NRVKKN
101: KKAKTPDPDP GSQKETNPDT DPTRMLYGFP IGDQDVKGME MGGGGGGSFS SLLASNMQLG LGGIMLDGSG WDPGMGLGMG LRRSEAGNGG GCSPWTDLAM
201: NRVKKN
001: MQDPAAYYQT MMAKQQQQQQ PQFAEQEQLK CPRCDSPNTK FCYYNNYNLS QPRHFCKSCR RYWTKGGALR NVPVGGGSRK NATKRSTSSS SSASSPSNSS
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
Arabidopsis Description
DOF3.1DOF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VA07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.