Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030423.1-P | Field mustard | nucleus | 99.38 | 86.49 |
| CDX87836 | Canola | nucleus | 96.89 | 85.71 |
| CDY52953 | Canola | nucleus | 72.05 | 59.79 |
| CDY46544 | Canola | nucleus | 73.29 | 59.0 |
| CDY56923 | Canola | nucleus | 56.52 | 48.92 |
| CDY51457 | Canola | nucleus | 56.52 | 47.64 |
| CDY32420 | Canola | nucleus | 60.25 | 47.09 |
| CDY48879 | Canola | nucleus | 59.63 | 46.6 |
| CDY37299 | Canola | nucleus | 57.14 | 46.0 |
| CDY69021 | Canola | nucleus | 55.28 | 45.18 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 42.86 | 35.2 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 44.72 | 33.33 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 41.61 | 29.91 |
| GSMUA_Achr10P... | Banana | nucleus | 42.24 | 29.82 |
| CDY71347 | Canola | nucleus | 23.6 | 28.79 |
| CDY52832 | Canola | nucleus | 36.02 | 26.13 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 37.89 | 26.07 |
| CDY17783 | Canola | nucleus | 36.02 | 25.33 |
| CDY18628 | Canola | nucleus | 32.92 | 25.0 |
| CDY58082 | Canola | nucleus | 31.68 | 24.76 |
| CDY20892 | Canola | nucleus | 31.68 | 24.76 |
| CDY12790 | Canola | nucleus | 32.92 | 24.2 |
| CDY01450 | Canola | nucleus | 32.92 | 24.09 |
| CDY54696 | Canola | nucleus | 35.4 | 23.95 |
| CDY37670 | Canola | nucleus | 24.84 | 23.81 |
| CDX99791 | Canola | nucleus | 25.47 | 23.7 |
| CDX81350 | Canola | nucleus | 32.92 | 23.66 |
| CDY67393 | Canola | nucleus | 24.84 | 23.53 |
| CDY50789 | Canola | nucleus | 25.47 | 23.43 |
| CDX83127 | Canola | nucleus | 34.16 | 23.4 |
| CDY02086 | Canola | nucleus | 34.78 | 23.14 |
| CDY43321 | Canola | nucleus | 24.84 | 22.99 |
| CDX90171 | Canola | nucleus | 24.84 | 22.99 |
| CDX75689 | Canola | nucleus, plastid | 34.16 | 22.73 |
| CDY23010 | Canola | nucleus | 34.78 | 22.67 |
| CDY15647 | Canola | nucleus | 24.84 | 22.6 |
| CDX69349 | Canola | nucleus, plastid | 33.54 | 22.31 |
| CDY17009 | Canola | nucleus | 29.81 | 20.87 |
| CDY44994 | Canola | nucleus | 29.19 | 17.41 |
| CDY00286 | Canola | nucleus | 26.71 | 15.75 |
| CDY69084 | Canola | nucleus | 26.71 | 15.69 |
| CDY67518 | Canola | nucleus | 27.33 | 15.07 |
| CDY69244 | Canola | nucleus | 26.71 | 14.73 |
| CDY50734 | Canola | nucleus | 24.22 | 14.39 |
| CDY46443 | Canola | nucleus | 29.81 | 14.33 |
| CDY72477 | Canola | nucleus | 30.43 | 13.32 |
| CDY16193 | Canola | nucleus | 26.71 | 13.15 |
| CDY01768 | Canola | nucleus | 29.81 | 13.04 |
| CDX95919 | Canola | nucleus | 29.81 | 13.04 |
| CDY67869 | Canola | nucleus | 31.06 | 12.99 |
| CDY07344 | Canola | nucleus | 31.06 | 12.95 |
| CDY50735 | Canola | extracellular | 27.95 | 12.36 |
| CDY47405 | Canola | nucleus | 31.06 | 11.65 |
| CDY37010 | Canola | nucleus | 27.95 | 11.54 |
| CDY66672 | Canola | nucleus | 29.81 | 11.24 |
| CDX67434 | Canola | nucleus | 28.57 | 10.87 |
| CDX74440 | Canola | nucleus | 28.57 | 10.85 |
| CDY30261 | Canola | nucleus | 28.57 | 10.45 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078I475 | UniProt:A0A078I475 | EnsemblPlants:CDY43923 | ProteinID:CDY43923 | ProteinID:CDY43923.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00077516001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI0004EF490A | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g15330DBnaA05g15330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I475]
Coordinates
chrLK032573:+:183929..184786
Molecular Weight (calculated)
18325.7 Da
IEP (calculated)
9.356
GRAVY (calculated)
-1.134
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDLTSAAAY YHHQSMLMMA AKQQQQPELP EQQQLKCPRC DSPNTKFCYY NNYNLSQPRH YCKNCRRYWT KGGSLRNIPV GGGSRKNTKR SSSSSPSSSN
101: LKDKTVAVPD QKPNSEEESR PKLVEEERRM TGQEMDPTRM LYGLPYPGIH LGLGPGIPRD D
101: LKDKTVAVPD QKPNSEEESR PKLVEEERRM TGQEMDPTRM LYGLPYPGIH LGLGPGIPRD D
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.