Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90171 | Canola | nucleus | 98.85 | 98.85 |
| Bra010848.1-P | Field mustard | nucleus | 98.28 | 97.71 |
| AT1G29160.1 | Thale cress | nucleus | 89.66 | 89.14 |
| CDY71347 | Canola | nucleus | 67.24 | 88.64 |
| CDX99791 | Canola | nucleus | 85.06 | 85.55 |
| CDY50789 | Canola | nucleus | 84.48 | 84.0 |
| CDY15647 | Canola | nucleus | 81.61 | 80.23 |
| CDY37670 | Canola | nucleus | 63.22 | 65.48 |
| CDY67393 | Canola | nucleus | 63.22 | 64.71 |
| VIT_10s0003g01260.t01 | Wine grape | nucleus | 56.32 | 61.64 |
| KRH42862 | Soybean | nucleus | 25.86 | 57.69 |
| KRH58964 | Soybean | nucleus | 48.85 | 51.52 |
| KRH21283 | Soybean | nucleus | 43.1 | 51.02 |
| PGSC0003DMT400087458 | Potato | nucleus | 48.28 | 50.91 |
| Solyc02g076850.1.1 | Tomato | nucleus | 47.13 | 50.31 |
| KRH11011 | Soybean | nucleus | 43.68 | 49.67 |
| CDY56923 | Canola | nucleus | 27.01 | 25.27 |
| CDY43923 | Canola | nucleus | 22.99 | 24.84 |
| CDY51457 | Canola | nucleus | 27.01 | 24.61 |
| CDY00286 | Canola | nucleus | 36.78 | 23.44 |
| CDY69084 | Canola | nucleus | 36.21 | 22.99 |
| CDX87836 | Canola | nucleus | 23.56 | 22.53 |
| CDY37299 | Canola | nucleus | 25.86 | 22.5 |
| CDY69021 | Canola | nucleus | 25.29 | 22.34 |
| CDY48879 | Canola | nucleus | 26.44 | 22.33 |
| CDY32420 | Canola | nucleus | 26.44 | 22.33 |
| CDY67518 | Canola | nucleus | 36.78 | 21.92 |
| CDY69244 | Canola | nucleus | 36.78 | 21.92 |
| CDY52953 | Canola | nucleus | 24.14 | 21.65 |
| CDY52832 | Canola | nucleus | 27.01 | 21.17 |
| CDY46544 | Canola | nucleus | 24.14 | 21.0 |
| CDY18628 | Canola | nucleus | 25.29 | 20.75 |
| CDY54696 | Canola | nucleus | 28.16 | 20.59 |
| CDY17783 | Canola | nucleus | 27.01 | 20.52 |
| CDX83127 | Canola | nucleus | 27.59 | 20.43 |
| CDY58082 | Canola | nucleus | 23.56 | 19.9 |
| CDY20892 | Canola | nucleus | 23.56 | 19.9 |
| CDY16193 | Canola | nucleus | 37.36 | 19.88 |
| CDX75689 | Canola | nucleus, plastid | 27.59 | 19.83 |
| CDX81350 | Canola | nucleus | 25.29 | 19.64 |
| CDX69349 | Canola | nucleus, plastid | 27.01 | 19.42 |
| CDY02086 | Canola | nucleus | 27.01 | 19.42 |
| CDY12790 | Canola | nucleus | 24.14 | 19.18 |
| CDY01450 | Canola | nucleus | 24.14 | 19.09 |
| CDY23010 | Canola | nucleus | 26.44 | 18.62 |
| CDY44994 | Canola | nucleus | 28.74 | 18.52 |
| CDY46443 | Canola | nucleus | 35.63 | 18.51 |
| CDY67869 | Canola | nucleus | 40.8 | 18.44 |
| CDY07344 | Canola | nucleus | 40.8 | 18.39 |
| CDY01768 | Canola | nucleus | 38.51 | 18.21 |
| CDX95919 | Canola | nucleus | 38.51 | 18.21 |
| CDY50734 | Canola | nucleus | 28.16 | 18.08 |
| CDY50735 | Canola | extracellular | 37.36 | 17.86 |
| CDY17009 | Canola | nucleus | 23.56 | 17.83 |
| CDY72477 | Canola | nucleus | 37.36 | 17.66 |
| CDY37010 | Canola | nucleus | 38.51 | 17.18 |
| CDX74440 | Canola | nucleus | 39.66 | 16.27 |
| CDY66672 | Canola | nucleus | 39.66 | 16.16 |
| CDY47405 | Canola | nucleus | 39.66 | 16.08 |
| CDX67434 | Canola | nucleus | 39.08 | 16.08 |
| CDY30261 | Canola | nucleus | 39.66 | 15.68 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 41.38 | 15.13 |
| TraesCS3A01G189600.1 | Wheat | nucleus | 40.8 | 14.92 |
| Os01t0277500-01 | Rice | nucleus | 43.68 | 13.72 |
| Zm00001d040455_P001 | Maize | nucleus | 39.66 | 13.45 |
| EES00579 | Sorghum | nucleus | 39.08 | 13.28 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078I0F1 | UniProt:A0A078I0F1 | EnsemblPlants:CDY43321 | ProteinID:CDY43321 | ProteinID:CDY43321.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00076369001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF14 | UniParc:UPI0004EB2169 | InterPro:Znf_Dof |
Description
BnaC03g58930DBnaC03g58930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0F1]
Coordinates
chrLK032552:-:75141..75665
Molecular Weight (calculated)
19331.0 Da
IEP (calculated)
9.806
GRAVY (calculated)
-0.545
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQDSQGIK LFGKTITFNA SNITTTTIKR EVHQQQPEVQ ATTDVRSSST DLTVEKRPDK IIACPRCKSM ETKFCYFNNY NVKQPRHFCR GCQRYWTAGG
101: ALRNVPVGAG RRKAKPPGRV GGFAEFLGAA TGAVDQVELD ALLVEEWRAA ASHGGFRHDF PVKRLRCYTD GQSC
101: ALRNVPVGAG RRKAKPPGRV GGFAEFLGAA TGAVDQVELD ALLVEEWRAA ASHGGFRHDF PVKRLRCYTD GQSC
001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
Arabidopsis Description
DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.