Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012901.1-P | Field mustard | nucleus | 93.12 | 95.04 |
| CDY02086 | Canola | nucleus | 92.71 | 94.63 |
| CDY17783 | Canola | nucleus | 74.09 | 79.91 |
| CDY54696 | Canola | nucleus | 76.52 | 79.41 |
| CDY52832 | Canola | nucleus | 70.85 | 78.83 |
| CDX83127 | Canola | nucleus | 74.9 | 78.72 |
| AT3G50410.1 | Thale cress | nucleus | 72.87 | 71.15 |
| CDY18628 | Canola | nucleus | 52.23 | 60.85 |
| CDY12790 | Canola | nucleus | 51.01 | 57.53 |
| CDY01450 | Canola | nucleus | 51.01 | 57.27 |
| CDX81350 | Canola | nucleus | 51.82 | 57.14 |
| KRH70017 | Soybean | nucleus | 51.01 | 53.85 |
| KRH08373 | Soybean | nucleus | 49.8 | 52.12 |
| CDY20892 | Canola | nucleus | 31.98 | 38.35 |
| CDY56923 | Canola | nucleus | 28.74 | 38.17 |
| CDY58082 | Canola | nucleus | 31.58 | 37.86 |
| CDY51457 | Canola | nucleus | 28.34 | 36.65 |
| CDY52953 | Canola | nucleus | 27.53 | 35.05 |
| CDY69021 | Canola | nucleus | 27.94 | 35.03 |
| CDY43923 | Canola | nucleus | 22.67 | 34.78 |
| CDX87836 | Canola | nucleus | 25.1 | 34.07 |
| CDY37299 | Canola | nucleus | 27.53 | 34.0 |
| CDY46544 | Canola | nucleus | 27.53 | 34.0 |
| CDY32420 | Canola | nucleus | 27.94 | 33.5 |
| CDY48879 | Canola | nucleus | 27.94 | 33.5 |
| CDY17009 | Canola | nucleus | 31.17 | 33.48 |
| CDY71347 | Canola | nucleus | 17.81 | 33.33 |
| Zm00001d039482_P001 | Maize | nucleus | 30.36 | 32.47 |
| KXG31638 | Sorghum | nucleus | 30.77 | 32.34 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 29.96 | 32.17 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 29.96 | 32.17 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 29.96 | 31.09 |
| CDX99791 | Canola | nucleus | 19.43 | 27.75 |
| CDY50789 | Canola | nucleus | 19.43 | 27.43 |
| CDX90171 | Canola | nucleus | 18.62 | 26.44 |
| CDY43321 | Canola | nucleus | 18.62 | 26.44 |
| CDX69349 | Canola | nucleus, plastid | 25.51 | 26.03 |
| CDY15647 | Canola | nucleus | 18.22 | 25.42 |
| CDX75689 | Canola | nucleus, plastid | 24.29 | 24.79 |
| CDY37670 | Canola | nucleus | 16.6 | 24.4 |
| CDY67393 | Canola | nucleus | 16.6 | 24.12 |
| CDY69244 | Canola | nucleus | 23.48 | 19.86 |
| CDY00286 | Canola | nucleus | 21.86 | 19.78 |
| CDY69084 | Canola | nucleus | 21.86 | 19.71 |
| CDY44994 | Canola | nucleus | 21.05 | 19.26 |
| CDY67518 | Canola | nucleus | 22.67 | 19.18 |
| CDY16193 | Canola | nucleus | 23.89 | 18.04 |
| CDY50734 | Canola | nucleus | 18.22 | 16.61 |
| CDY46443 | Canola | nucleus | 22.27 | 16.42 |
| CDY67869 | Canola | nucleus | 25.1 | 16.1 |
| CDY07344 | Canola | nucleus | 25.1 | 16.06 |
| CDX95919 | Canola | nucleus | 23.89 | 16.03 |
| CDY50735 | Canola | extracellular | 23.48 | 15.93 |
| CDY01768 | Canola | nucleus | 23.48 | 15.76 |
| CDY72477 | Canola | nucleus | 23.08 | 15.49 |
| CDY66672 | Canola | nucleus | 26.72 | 15.46 |
| CDY47405 | Canola | nucleus | 26.72 | 15.38 |
| CDY37010 | Canola | nucleus | 23.08 | 14.62 |
| CDX67434 | Canola | nucleus | 24.7 | 14.42 |
| CDX74440 | Canola | nucleus | 24.7 | 14.39 |
| CDY30261 | Canola | nucleus | 24.7 | 13.86 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078G9B6 | UniProt:A0A078G9B6 | EnsemblPlants:CDY23010 | ProteinID:CDY23010 | ProteinID:CDY23010.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00021458001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0004EDEC4A | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g31770DBnaC07g31770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9B6]
Coordinates
chrLK032139:-:59318..60061
Molecular Weight (calculated)
25843.8 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.423
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSDSGESR RTAMRPHDGI TGLPPATEQQ EQLPCPRCDS ANTKFCYYNN YNFSQPRHFC KSCRRYWTHG GTLRDIPVGG GTRKAAKRSR TCSSSAGVLN
101: APLQATPVLF PQTSLSNGGS HAVNVTAPLE NDGKGGSLSL CGSFTSLLNQ NGNAASATTH GTGGFGSGLG SGYDDVSFGL GRAAWPFSTV GDAATTNAVS
201: NGAHHAVQIP STWQFEGLES SNAGGFVPGE YFAWPDLSIT TPVSSLK
101: APLQATPVLF PQTSLSNGGS HAVNVTAPLE NDGKGGSLSL CGSFTSLLNQ NGNAASATTH GTGGFGSGLG SGYDDVSFGL GRAAWPFSTV GDAATTNAVS
201: NGAHHAVQIP STWQFEGLES SNAGGFVPGE YFAWPDLSIT TPVSSLK
001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
Arabidopsis Description
DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.