Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08373 | Soybean | nucleus | 86.75 | 86.02 |
| VIT_07s0255g00020.t01 | Wine grape | nucleus | 62.82 | 66.82 |
| PGSC0003DMT400026137 | Potato | nucleus | 57.69 | 56.25 |
| Bra012901.1-P | Field mustard | nucleus | 54.7 | 52.89 |
| CDY02086 | Canola | nucleus | 54.27 | 52.48 |
| CDY52832 | Canola | nucleus | 49.15 | 51.8 |
| Bra036082.1-P | Field mustard | nucleus | 48.72 | 51.35 |
| CDY23010 | Canola | nucleus | 53.85 | 51.01 |
| CDY17783 | Canola | nucleus | 49.57 | 50.66 |
| AT3G50410.1 | Thale cress | nucleus | 54.7 | 50.59 |
| CDY54696 | Canola | nucleus | 51.28 | 50.42 |
| Bra030010.1-P | Field mustard | nucleus | 50.43 | 50.21 |
| CDX83127 | Canola | nucleus | 50.43 | 50.21 |
| Solyc02g090220.2.1 | Tomato | nucleus | 55.13 | 50.0 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 35.9 | 48.55 |
| KRH47156 | Soybean | nucleus | 37.18 | 41.23 |
| KRH44186 | Soybean | nucleus | 37.18 | 40.85 |
| KRH23341 | Soybean | nucleus | 36.32 | 40.09 |
| KRH09992 | Soybean | nucleus | 35.9 | 39.81 |
| KRH42862 | Soybean | nucleus | 10.68 | 32.05 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 29.91 | 30.43 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 29.06 | 29.57 |
| KRH21283 | Soybean | nucleus | 18.38 | 29.25 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 29.49 | 28.99 |
| KRH11011 | Soybean | nucleus | 18.8 | 28.76 |
| Zm00001d039482_P001 | Maize | nucleus | 28.21 | 28.57 |
| KXG31638 | Sorghum | nucleus | 28.63 | 28.51 |
| KRH58964 | Soybean | nucleus | 18.38 | 26.06 |
| KRG93541 | Soybean | nucleus | 25.21 | 15.32 |
| KRH03487 | Soybean | nucleus | 30.77 | 15.29 |
| KRH56903 | Soybean | nucleus | 30.77 | 15.22 |
| KRH74885 | Soybean | nucleus | 29.49 | 14.4 |
| KRH01188 | Soybean | nucleus | 30.77 | 14.37 |
| KRH40083 | Soybean | nucleus | 30.77 | 14.31 |
| KRH18471 | Soybean | nucleus | 29.49 | 14.14 |
| KRH70746 | Soybean | nucleus, plastid | 29.06 | 14.02 |
| KRH50577 | Soybean | nucleus | 28.63 | 13.99 |
| KRH54567 | Soybean | nucleus | 26.92 | 13.76 |
| KRG89621 | Soybean | nucleus | 28.21 | 13.69 |
| KRH63324 | Soybean | nucleus | 26.92 | 13.4 |
| KRH44749 | Soybean | nucleus | 23.93 | 12.9 |
| KRH13096 | Soybean | nucleus, vacuole | 25.21 | 12.66 |
| KRH64974 | Soybean | nucleus | 23.08 | 11.71 |
| KRG94921 | Soybean | nucleus | 23.5 | 11.39 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:778095 | EMBL:ACUP02000745 | EnsemblPlantsGene:GLYMA_02G062700 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | UniProt:K7K6R9 | EnsemblPlants:KRH70017 | ProteinID:KRH70017 | ProteinID:KRH70017.1 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0002336DE6 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:5654059..5654763
Molecular Weight (calculated)
24407.1 Da
IEP (calculated)
8.490
GRAVY (calculated)
-0.548
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSNSGESR RASKPQSSGG AAPPPPEQEN LPCPRCDSTN TKFCYYNNYN YSQPRHFCKS CRRYWTHGGT LRDIPVGGGS RKNAKRSRTH HVAATSSSST
101: SSTMTSAQEH HAHTLLAPVA STHYGVLDGD VKQTSNGNGN VCGSFTSLLN NTHGSGFLAL GGFGLGHGYD DMGFGIGRSG WAFPGMVDGG NIGGAVASSG
201: LNTWQLESGE GGFVSGDCFA WPGLAISTPG NGLK
101: SSTMTSAQEH HAHTLLAPVA STHYGVLDGD VKQTSNGNGN VCGSFTSLLN NTHGSGFLAL GGFGLGHGYD DMGFGIGRSG WAFPGMVDGG NIGGAVASSG
201: LNTWQLESGE GGFVSGDCFA WPGLAISTPG NGLK
001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
Arabidopsis Description
DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.