Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18471 | Soybean | nucleus | 89.09 | 70.29 |
| KRH42862 | Soybean | nucleus | 9.87 | 48.72 |
| KRH40083 | Soybean | nucleus | 63.12 | 48.31 |
| KRH01188 | Soybean | nucleus | 62.86 | 48.3 |
| KRH21283 | Soybean | nucleus | 15.58 | 40.82 |
| KRH11011 | Soybean | nucleus | 15.84 | 39.87 |
| VIT_01s0026g02580.t01 | Wine grape | nucleus | 48.31 | 38.99 |
| VIT_17s0000g06310.t01 | Wine grape | nucleus | 47.53 | 38.69 |
| KRH58964 | Soybean | nucleus | 16.1 | 37.58 |
| KRH03487 | Soybean | nucleus | 42.34 | 34.61 |
| KRH56903 | Soybean | nucleus | 41.82 | 34.04 |
| KRH63324 | Soybean | nucleus | 41.04 | 33.62 |
| KRH54567 | Soybean | nucleus | 39.74 | 33.41 |
| KRH74885 | Soybean | nucleus | 38.96 | 31.32 |
| KRH70746 | Soybean | nucleus, plastid | 38.96 | 30.93 |
| KRH50577 | Soybean | nucleus | 38.44 | 30.9 |
| EER95426 | Sorghum | nucleus | 33.25 | 30.19 |
| Zm00001d027846_P001 | Maize | nucleus | 33.77 | 30.09 |
| KRG89621 | Soybean | nucleus | 37.66 | 30.08 |
| Os03t0169600-01 | Rice | nucleus | 33.51 | 29.32 |
| TraesCS4A01G017700.1 | Wheat | nucleus | 32.73 | 28.83 |
| KRH09992 | Soybean | nucleus | 15.58 | 28.44 |
| TraesCS4B01G286400.1 | Wheat | nucleus | 31.95 | 28.41 |
| KRH23341 | Soybean | nucleus | 15.58 | 28.3 |
| HORVU4Hr1G074990.1 | Barley | nucleus | 32.47 | 28.28 |
| TraesCS4D01G285100.1 | Wheat | nucleus | 32.47 | 28.28 |
| KRH44186 | Soybean | nucleus | 15.06 | 27.23 |
| KRH47156 | Soybean | nucleus | 14.81 | 27.01 |
| KRG94921 | Soybean | nucleus | 33.25 | 26.5 |
| KRH64974 | Soybean | nucleus | 31.17 | 26.03 |
| Os07t0685000-02 | Rice | nucleus | 31.43 | 25.42 |
| OQU90492 | Sorghum | nucleus | 31.95 | 25.41 |
| KRH70017 | Soybean | nucleus | 15.32 | 25.21 |
| HORVU2Hr1G017290.1 | Barley | nucleus | 30.91 | 25.05 |
| TraesCS2A01G100800.1 | Wheat | nucleus | 31.17 | 25.05 |
| TraesCS2B01G118000.1 | Wheat | nucleus | 30.91 | 24.84 |
| KRH44749 | Soybean | nucleus | 27.01 | 23.96 |
| TraesCS2D01G100300.1 | Wheat | mitochondrion, nucleus | 31.17 | 23.95 |
| Zm00001d022525_P001 | Maize | nucleus | 31.43 | 23.5 |
| KRH13096 | Soybean | nucleus, vacuole | 28.31 | 23.39 |
| KRH08373 | Soybean | nucleus | 14.29 | 23.31 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:778120 | EMBL:ACUP02011589 | EnsemblPlantsGene:GLYMA_19G023200 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1N654 | InterPro:IPR003851 | EnsemblPlants:KRG93541 | ProteinID:KRG93541 | ProteinID:KRG93541.1 | EMBL:KT031147 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | UniParc:UPI00023D9B86 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:2679631..2682996
Molecular Weight (calculated)
41963.8 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.634
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MLESKDSTMK LFGKTIPAPE ISAGAPALSS GDADAVGVVQ NHGSSSVNGD GEEHEIEQDI MGEETTESEK EDEVTNLDTV SRPGEVSINP STKKEDLTLK
101: TSKKTEQEQG ENSQDKTLRK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGVMRNVPV GAGRRKNKNF TSQYRQITVP EAALLSSQPD
201: LPNGVSHPSL NCNATLLAFG SDTPLCESMT SVLNLAEKAV NNSTTNGFNG SEELEIPFAY VAGEKVNDDS NKSSDMSTKP MEGETTNRSQ EQVIENCHPF
301: PPHAPYFPGA PWPFPWNPAL WNSPVPSPPA FFPQGFTMPL YPAAAYWGLT IPGAWSIPWL AQPSLPNSTV SNSGPDPIAR TIAMS
101: TSKKTEQEQG ENSQDKTLRK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGVMRNVPV GAGRRKNKNF TSQYRQITVP EAALLSSQPD
201: LPNGVSHPSL NCNATLLAFG SDTPLCESMT SVLNLAEKAV NNSTTNGFNG SEELEIPFAY VAGEKVNDDS NKSSDMSTKP MEGETTNRSQ EQVIENCHPF
301: PPHAPYFPGA PWPFPWNPAL WNSPVPSPPA FFPQGFTMPL YPAAAYWGLT IPGAWSIPWL AQPSLPNSTV SNSGPDPIAR TIAMS
001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
Arabidopsis Description
CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.