Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13096 | Soybean | nucleus, vacuole | 81.57 | 75.97 |
| KRH42862 | Soybean | nucleus | 7.83 | 43.59 |
| KRH21283 | Soybean | nucleus | 13.59 | 40.14 |
| KRH11011 | Soybean | nucleus | 14.06 | 39.87 |
| KRH58964 | Soybean | nucleus | 13.82 | 36.36 |
| VIT_08s0056g01230.t01 | Wine grape | nucleus | 39.4 | 34.62 |
| KRH64974 | Soybean | nucleus | 33.64 | 31.67 |
| KRG94921 | Soybean | nucleus | 34.1 | 30.64 |
| KRH56903 | Soybean | nucleus | 32.95 | 30.23 |
| KRH03487 | Soybean | nucleus | 32.72 | 30.15 |
| KRH54567 | Soybean | nucleus | 31.34 | 29.69 |
| KRH18471 | Soybean | nucleus | 33.18 | 29.51 |
| Solyc02g088070.2.1 | Tomato | nucleus | 31.34 | 29.44 |
| KRH40083 | Soybean | nucleus | 33.87 | 29.22 |
| KRH01188 | Soybean | nucleus | 33.64 | 29.14 |
| KRH74885 | Soybean | nucleus | 32.03 | 29.02 |
| KRH70746 | Soybean | nucleus, plastid | 32.26 | 28.87 |
| PGSC0003DMT400003359 | Potato | nucleus | 31.8 | 28.34 |
| KRH63324 | Soybean | nucleus | 30.65 | 28.3 |
| KRH44186 | Soybean | nucleus | 13.82 | 28.17 |
| KRH50577 | Soybean | nucleus | 30.41 | 27.56 |
| KRG89621 | Soybean | nucleus | 30.18 | 27.18 |
| EES00579 | Sorghum | nucleus | 32.03 | 27.15 |
| Zm00001d040455_P001 | Maize | nucleus | 32.03 | 27.1 |
| KRH47156 | Soybean | nucleus | 13.13 | 27.01 |
| KRG93541 | Soybean | nucleus | 23.96 | 27.01 |
| Os01t0277500-01 | Rice | nucleus | 34.1 | 26.71 |
| TraesCS3A01G189600.1 | Wheat | nucleus | 28.8 | 26.26 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 28.57 | 26.05 |
| KRH09992 | Soybean | nucleus | 12.44 | 25.59 |
| KRH23341 | Soybean | nucleus | 11.75 | 24.06 |
| KRH70017 | Soybean | nucleus | 12.9 | 23.93 |
| KRH08373 | Soybean | nucleus | 12.67 | 23.31 |
Protein Annotations
| EntrezGene:102664782 | MapMan:15.5.1.5 | EMBL:ACUP02004955 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G228900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003851 | UniProt:K7L890 | EnsemblPlants:KRH44749 | ProteinID:KRH44749 | ProteinID:KRH44749.1 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF15 |
| UniParc:UPI0002952BBB | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:18694626..18697551
Molecular Weight (calculated)
47906.0 Da
IEP (calculated)
7.115
GRAVY (calculated)
-0.612
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGLEESTND EVDVPLNEVS SKQIDPQEDG NSAPNIYKNP TLKLVAKVVN GNNEHRNAKR DIDHQEKVLK RANKVLPCPR CNSSETKFCY FNNYNVNQPR
101: HFCKNCQRYW TAGGTIRNVP LGAGKRKNKH STLQYCLIPV TPDAASVSQT DSKPASDMLL SSSRLIKGME NISSLREETP LSESLETVLS LNGQTNIEMA
201: SSTLKDDAEE SSSSSMRSNE VEQVCLAQHS LVPLQSFQYY PVPSWSYQWN PCWNVKELRP RSLSSRPVYT GSPTMIAVPG FSLPTVILPG VPYSYSGFMS
301: NWDEQKEDAS LVGSAFSGIS LSPSSVSNST CSGNRSPTLG KHSRDGSTLG EDAMKQNLWV PKTVRINDPE EAANSSIWST LGTKSEQNKL IMKGSIFKSF
401: EPKASASSHI LEDNQILRAN PAAFSRSESF QESM
101: HFCKNCQRYW TAGGTIRNVP LGAGKRKNKH STLQYCLIPV TPDAASVSQT DSKPASDMLL SSSRLIKGME NISSLREETP LSESLETVLS LNGQTNIEMA
201: SSTLKDDAEE SSSSSMRSNE VEQVCLAQHS LVPLQSFQYY PVPSWSYQWN PCWNVKELRP RSLSSRPVYT GSPTMIAVPG FSLPTVILPG VPYSYSGFMS
301: NWDEQKEDAS LVGSAFSGIS LSPSSVSNST CSGNRSPTLG KHSRDGSTLG EDAMKQNLWV PKTVRINDPE EAANSSIWST LGTKSEQNKL IMKGSIFKSF
401: EPKASASSHI LEDNQILRAN PAAFSRSESF QESM
001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
Arabidopsis Description
CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.