CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64974	Soybean	nucleus	86.54	90.67
KRH42862	Soybean	nucleus	8.28	51.28
VIT_08s0056g01230.t01	Wine grape	nucleus	47.2	46.15
KRH21283	Soybean	nucleus	12.42	40.82
KRH58964	Soybean	nucleus	13.25	38.79
KRH11011	Soybean	nucleus	12.22	38.56
KRH01188	Soybean	nucleus	38.92	37.52
KRH40083	Soybean	nucleus	38.92	37.38
KRH56903	Soybean	nucleus	34.78	35.52
KRH54567	Soybean	nucleus	33.54	35.37
KRH63324	Soybean	nucleus	33.95	34.89
KRH03487	Soybean	nucleus	33.95	34.82
Solyc02g088070.2.1	Tomato	nucleus	33.13	34.63
KRH18471	Soybean	nucleus	34.99	34.63
KRH44749	Soybean	nucleus	30.64	34.1
KRH50577	Soybean	nucleus	33.75	34.03
KRG93541	Soybean	nucleus	26.5	33.25
KRH74885	Soybean	nucleus	32.71	32.99
KRG89621	Soybean	nucleus	32.71	32.78
KRH70746	Soybean	nucleus, plastid	32.71	32.58
PGSC0003DMT400003359	Potato	nucleus	32.3	32.03
TraesCS3A01G189600.1	Wheat	nucleus	31.47	31.93
KRH13096	Soybean	nucleus, vacuole	30.64	31.76
TraesCS3D01G193100.1	Wheat	nucleus	31.06	31.51
Zm00001d040455_P001	Maize	nucleus	32.71	30.8
EES00579	Sorghum	nucleus	32.51	30.66
KRH44186	Soybean	nucleus	12.84	29.11
Os01t0277500-01	Rice	nucleus	32.92	28.7
KRH47156	Soybean	nucleus	12.42	28.44
KRH09992	Soybean	nucleus	11.39	26.07
KRH23341	Soybean	nucleus	11.18	25.47
KRH70017	Soybean	nucleus	11.39	23.5
KRH08373	Soybean	nucleus	11.18	22.88

Protein Annotations

MapMan:15.5.1.5	EMBL:ACUP02012056	EnsemblPlantsGene:GLYMA_19G118000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
UniProt:K7MXY4	EnsemblPlants:KRG94921	ProteinID:KRG94921	ProteinID:KRG94921.1	PFAM:PD007478	PFAM:PF02701
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	PANTHER:PTHR31089:SF15	UniParc:UPI000233E31A	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:37468800..37471799

Molecular Weight (calculated)

52840.3 Da

IEP (calculated)

7.729

GRAVY (calculated)

-0.631

Length

483 amino acids

Sequence
(BLAST)

001: MSQKEKGPGI RLFGRKIPVP ECQIPANSGP TDTCCSIKKT ELKIPSECGE NSEQQENSSD SRDSKQESQH KVQENEPIVN PKPVEDNMET GSSDQDKVLK
101: KPDKILQCPR CNSMDTKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRNVP IGAGRRKNKH LASQYQHIIV TSDGIPASRL ETTDSSGLQQ QHIASLESSV
201: SFRSSADNCT MLKFGTDTPL CKSMDSMLNL RDQRRCADAS SISCVEYRGE PSLCGSSVMT NGAQGNELSE HNTSNWLQCY PVPPWVLPYP GWNNVNSMEA
301: VHRSSAPMCN PYNNTGPTAM QWCPTPMVAI PGMCPPSIPL QFVPPSYWSG TPLWNAGTGA VSIGSNACLS PTSSTNNSCC SGNGSPTLGK HTRDTVCTDE
401: EKSEKCVLVP KTIRIDAPNE ASKSPIIRAT LAIKLDKQQF VSNGDILKKI EPKEGKDRVL GASQILEANP AAISRAHAFQ ESL

Best Arabidopsis Sequence Match ( AT5G39660.1 )
(BLAST)

001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS

Arabidopsis Description

CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.