CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94921	Soybean	nucleus	90.67	86.54
KRH42862	Soybean	nucleus	8.46	50.0
VIT_08s0056g01230.t01	Wine grape	nucleus	47.07	43.93
KRH58964	Soybean	nucleus	13.88	38.79
KRH21283	Soybean	nucleus	12.15	38.1
KRH11011	Soybean	nucleus	11.93	35.95
KRH01188	Soybean	nucleus	38.83	35.73
KRH40083	Soybean	nucleus	38.83	35.59
KRH56903	Soybean	nucleus	34.92	34.04
KRH44749	Soybean	nucleus	31.67	33.64
KRH03487	Soybean	nucleus	34.27	33.55
KRH18471	Soybean	nucleus	35.36	33.4
KRH54567	Soybean	nucleus	32.97	33.19
KRH50577	Soybean	nucleus	33.84	32.57
KRH63324	Soybean	nucleus	33.19	32.55
Solyc02g088070.2.1	Tomato	nucleus	32.54	32.47
KRH13096	Soybean	nucleus, vacuole	31.89	31.55
KRG89621	Soybean	nucleus	32.97	31.54
KRG93541	Soybean	nucleus	26.03	31.17
KRH70746	Soybean	nucleus, plastid	32.75	31.13
KRH74885	Soybean	nucleus	32.32	31.11
PGSC0003DMT400003359	Potato	nucleus	32.75	31.01
TraesCS3A01G189600.1	Wheat	nucleus	31.24	30.25
TraesCS3D01G193100.1	Wheat	nucleus	30.8	29.83
EES00579	Sorghum	nucleus	32.97	29.69
Zm00001d040455_P001	Maize	nucleus	32.54	29.24
KRH44186	Soybean	nucleus	13.02	28.17
KRH47156	Soybean	nucleus	12.58	27.49
Os01t0277500-01	Rice	nucleus	32.75	27.26
KRH09992	Soybean	nucleus	11.71	25.59
KRH23341	Soybean	nucleus	11.5	25.0
KRH70017	Soybean	nucleus	11.71	23.08
KRH08373	Soybean	nucleus	11.28	22.03

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A0R0KD59	EMBL:ACUP02001305	EnsemblPlantsGene:GLYMA_03G007900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	EnsemblPlants:KRH64974	ProteinID:KRH64974	ProteinID:KRH64974.1	PFAM:PD007478	PFAM:PF02701
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	PANTHER:PTHR31089:SF15	UniParc:UPI0006ED6A9F	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:764330..766878

Molecular Weight (calculated)

50326.1 Da

IEP (calculated)

7.114

GRAVY (calculated)

-0.665

Length

461 amino acids

Sequence
(BLAST)

001: MSQTEKDPGI RLFGRKIPVP ECQIPANSGP KDACSSIMKT ELGIPSECGE NTEQQENSSD SRDSKQESQH KLQENEPIVN PKPAEDDMET GSSDQDKVLK
101: KPDKILQCPR CNSLDTKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRNVP IGAGRRKNKH LASQYRHIIV TSDGIPTSRL ETTDSVNAGA FLHPPISQLG
201: ESMDSMLNLR DQRRCVDASS ISCVEYRGEP SLYGSSVTTN GAQGSELSEH SPSNWLQCYP VPPWVLPYPG WNNVNSMEAV HRSSAPMCNP YNNTGPAAMQ
301: WCPTPMVAIP GMCPPSIPLQ FVPPSYWSGT QLWNAGTGTV SIGSNACLSP SSSTSNSCCS GNGSPTLGKH TRDTVCTNEE KSEKCVSVPK TIRIDAPNEA
401: SKSPIRATLA IKPDMQQFVS NGDILKKNEP KEGKDRMLGA SQILEANPAA ISRAHAFQEG L

Best Arabidopsis Sequence Match ( AT3G47500.1 )
(BLAST)

001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI

Arabidopsis Description

CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.