CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44749	Soybean	nucleus	75.97	81.57
KRH42862	Soybean	nucleus	7.08	42.31
KRH21283	Soybean	nucleus	12.02	38.1
KRH11011	Soybean	nucleus	12.45	37.91
VIT_08s0056g01230.t01	Wine grape	nucleus	38.63	36.44
KRH58964	Soybean	nucleus	12.66	35.76
KRH64974	Soybean	nucleus	31.55	31.89
KRH54567	Soybean	nucleus	30.9	31.44
KRG94921	Soybean	nucleus	31.76	30.64
KRH63324	Soybean	nucleus	30.69	30.43
KRH18471	Soybean	nucleus	31.76	30.33
KRH56903	Soybean	nucleus	30.69	30.23
KRH01188	Soybean	nucleus	32.4	30.14
KRH44186	Soybean	nucleus	13.73	30.05
KRH40083	Soybean	nucleus	32.4	30.02
KRH03487	Soybean	nucleus	30.26	29.94
KRH74885	Soybean	nucleus	30.69	29.85
Solyc02g088070.2.1	Tomato	nucleus	29.18	29.44
KRH70746	Soybean	nucleus, plastid	30.47	29.28
KRH47156	Soybean	nucleus	13.09	28.91
PGSC0003DMT400003359	Potato	nucleus	30.04	28.75
KRG93541	Soybean	nucleus	23.39	28.31
KRH09992	Soybean	nucleus	12.66	27.96
Zm00001d040455_P001	Maize	nucleus	30.47	27.68
KRH50577	Soybean	nucleus	28.33	27.56
EES00579	Sorghum	nucleus	30.04	27.34
TraesCS3A01G189600.1	Wheat	nucleus	27.9	27.31
KRG89621	Soybean	nucleus	28.11	27.18
TraesCS3D01G193100.1	Wheat	nucleus	27.68	27.1
Os01t0277500-01	Rice	nucleus	31.76	26.71
KRH23341	Soybean	nucleus	12.02	26.42
KRH70017	Soybean	nucleus	12.66	25.21
KRH08373	Soybean	nucleus	12.45	24.58

Protein Annotations

EntrezGene:102666857	MapMan:15.5.1.5	EMBL:ACUP02009539	EnsemblPlantsGene:GLYMA_15G215500	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:K7MCW1	EnsemblPlants:KRH13096	ProteinID:KRH13096	ProteinID:KRH13096.1	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	PANTHER:PTHR31089:SF15	UniParc:UPI000294B8EE
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:35275690..35278938

Molecular Weight (calculated)

52084.3 Da

IEP (calculated)

7.328

GRAVY (calculated)

-0.577

Length

466 amino acids

Sequence
(BLAST)

001: MVMPFNPPLL FHFHSRDLFL LTCCSFSCES FSNGLEESTN NEVDVPLNEV SNKLIDPHKY GYGTPNLNKN TTLKLVPKVV HRTNEHRNAK REIDHQEKVF
101: KKPDKVLPCP RCNSLETKFC YFNNYNVNQP RHFCKNCQRY WTAGGTIRNI PVGTGKRKNK HSAQYCQIPM TPDAASVIQT DSKPASDMLL LSNELPVTSR
201: PIKGGEETPL SESLETVLSL NGLTKIEVDS STLKDDDDEE PSSSSMRSSE IEQLGLPQHS NGLVPLHSFH YYHVPSWPYQ WNPCWNVKEF RPSNISSRAV
301: YTDSSTMMAV PGFSIPTVIL PGVPYSYLGF MSSWAEQKEE ASLVGSAFSG ISLSSCSVSN STCSGNRSPT LGKHPRDGST PGEDAMKQNL WVPKTVRIND
401: PEEAANSSIW STLGTKSEQN KFIMKGSVFK SFEPKSQASP HILDDNQILR ANPAAFSRSE SFQERM

Best Arabidopsis Sequence Match ( AT3G47500.1 )
(BLAST)

001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI

Arabidopsis Description

CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.