CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89621	Soybean	nucleus	88.73	88.17
KRH74885	Soybean	nucleus	57.62	57.62
KRH70746	Soybean	nucleus, plastid	57.83	57.11
KRH42862	Soybean	nucleus	8.77	53.85
KRH01188	Soybean	nucleus	48.43	46.31
KRH56903	Soybean	nucleus	45.51	46.09
KRH03487	Soybean	nucleus	45.3	46.07
GSMUA_Achr5P07660_001	Banana	nucleus	29.02	46.03
KRH54567	Soybean	nucleus	43.22	45.2
KRH40083	Soybean	nucleus	47.39	45.13
GSMUA_Achr9P05020_001	Banana	nucleus	30.9	45.12
KRH58964	Soybean	nucleus	15.24	44.24
KRH63324	Soybean	nucleus	42.8	43.62
KRH21283	Soybean	nucleus	13.36	43.54
KRH11011	Soybean	nucleus	13.36	41.83
KRH18471	Soybean	nucleus	41.75	40.98
GSMUA_Achr6P32240_001	Banana	nucleus	31.94	39.33
CDY01768	Canola	nucleus	30.06	39.13
CDX95919	Canola	nucleus	30.06	39.13
CDY16193	Canola	nucleus	26.3	38.53
Bra024683.1-P	Field mustard	nucleus	26.3	38.53
KRG93541	Soybean	nucleus	30.9	38.44
CDY72477	Canola	nucleus	29.23	38.04
Bra004396.1-P	Field mustard	nucleus	29.23	38.04
CDY07344	Canola	nucleus	29.65	36.79
Bra003994.1-P	Field mustard	nucleus	29.65	36.79
CDY67869	Canola	nucleus	29.23	36.36
AT1G69570.1	Thale cress	nucleus	30.27	36.34
GSMUA_Achr11P...	Banana	nucleus	31.11	35.39
CDY50735	Canola	extracellular	26.72	35.16
AT1G26790.1	Thale cress	nucleus, plastid	26.93	34.68
KRH64974	Soybean	nucleus	32.57	33.84
KRG94921	Soybean	nucleus	34.03	33.75
Bra016286.1-P	Field mustard	nucleus	23.38	33.43
CDY44994	Canola	nucleus	18.79	33.33
CDY46443	Canola	nucleus	23.17	33.13
EES02731	Sorghum	nucleus	37.58	32.14
CDY50734	Canola	nucleus	17.95	31.73
TraesCS3B01G210300.1	Wheat	nucleus	35.28	31.35
TraesCS3D01G185500.2	Wheat	nucleus	34.66	30.86
TraesCS3A01G180600.1	Wheat	nucleus	34.66	30.8
KRH44749	Soybean	nucleus	27.56	30.41
KRH44186	Soybean	nucleus	13.36	30.05
Zm00001d040362_P001	Maize	nucleus	35.49	29.72
KRH47156	Soybean	nucleus	12.94	29.38
KRH09992	Soybean	nucleus	12.94	29.38
Os01t0264000-01	Rice	nucleus	30.06	29.03
KRH70017	Soybean	nucleus	13.99	28.63
KRH13096	Soybean	nucleus, vacuole	27.56	28.33
KRH23341	Soybean	nucleus	12.53	28.3
GSMUA_Achr2P11520_001	Banana	nucleus	27.35	28.17
KRH08373	Soybean	nucleus	13.15	26.69

Protein Annotations

EntrezGene:100813315	MapMan:15.5.1.5	EMBL:ACUP02004708	EnsemblPlantsGene:GLYMA_07G229600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
UniProt:I1KMH1	InterPro:IPR003851	ProteinID:KRH50576.1	EnsemblPlants:KRH50577	ProteinID:KRH50577	ProteinID:KRH50577.1
PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089	UniParc:UPI000233892E
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:40955133..40958725

Molecular Weight (calculated)

51888.0 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.758

Length

479 amino acids

Sequence
(BLAST)

001: MSEVKDPAIK LFGRTISLTH THINDSSSSS APARAPSSSS SPREVTSSAT QQQHEPEEPS RKELTSSQDD DGSHQTTEDL KSPTTSSGIF ENPKTPSPET
101: ETSVPKSSTN GEQSETSASD EKTPKKPDKV LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR RKNKNFPATA SHYRHLMFPE
201: GLQGATLNAP NGLHNAVLGN GAAVLTFGPD SPLCDTMASM LNIAERAQSC VPNGFQATEP NSFVSYRKEE DGSTSGHSTG VSVATTSTSS HSGSHESVDK
301: RVEGFTPQLP YFPSGPWPYP MPPPTFCPPG YPLSFYTTPA YWGCMPPSWN NNISSISPQS SVNNSVSVLT LGKHSRDGNI IAPSNSQREM HDMEHKSSEH
401: NVLIPKTLRI DDPSEAAKSS ISMWSKLGIK DDKAGSGGLF KAFPSSKGND MNHHMVEASP LLQANPAALS RSLTFREQT

Best Arabidopsis Sequence Match ( AT1G69570.1 )
(BLAST)

001: MSKSRDTEIK LFGRTITSLL DVNCYDPSSL SPVHDVSSDP SKEDSSSSSS SCSPTIGPIR VPVKKSEQES NKFKDPYILS DLNEPPKAVS EISSPRSSKN
101: NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED
201: CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK
301: RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ

Arabidopsis Description

CDF5Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.