Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P05020_001 | Banana | nucleus | 36.99 | 52.44 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 29.46 | 45.36 |
| GSMUA_Achr2P09110_001 | Banana | nucleus | 10.54 | 41.18 |
| GSMUA_Achr11P... | Banana | nucleus | 33.98 | 37.53 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 30.54 | 36.5 |
| GSMUA_Achr11P... | Banana | nucleus | 18.92 | 36.36 |
| GSMUA_Achr4P15140_001 | Banana | nucleus | 11.4 | 35.57 |
| GSMUA_Achr4P08020_001 | Banana | nucleus | 11.18 | 34.44 |
| GSMUA_Achr6P10720_001 | Banana | nucleus | 19.35 | 32.97 |
| GSMUA_Achr9P06430_001 | Banana | nucleus | 10.32 | 31.17 |
| GSMUA_Achr10P... | Banana | nucleus | 23.66 | 30.81 |
| CDY16193 | Canola | nucleus | 21.08 | 29.97 |
| Bra024683.1-P | Field mustard | nucleus | 21.08 | 29.97 |
| CDY44994 | Canola | nucleus | 17.2 | 29.63 |
| GSMUA_Achr2P22000_001 | Banana | nucleus | 24.09 | 29.63 |
| Os01t0264000-01 | Rice | nucleus | 31.18 | 29.23 |
| GSMUA_Achr11P... | Banana | nucleus | 29.03 | 28.97 |
| CDX95919 | Canola | nucleus | 22.8 | 28.8 |
| GSMUA_Achr3P01850_001 | Banana | nucleus | 21.29 | 28.61 |
| CDY01768 | Canola | nucleus | 22.58 | 28.53 |
| CDY72477 | Canola | nucleus | 22.37 | 28.26 |
| Bra004396.1-P | Field mustard | nucleus | 22.37 | 28.26 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 32.26 | 27.83 |
| CDY67869 | Canola | nucleus | 23.01 | 27.79 |
| CDY46443 | Canola | nucleus | 20.0 | 27.76 |
| Bra016286.1-P | Field mustard | nucleus | 20.0 | 27.76 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 31.83 | 27.51 |
| CDY07344 | Canola | nucleus | 22.8 | 27.46 |
| Bra003994.1-P | Field mustard | nucleus | 22.8 | 27.46 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 31.83 | 27.46 |
| KRH50577 | Soybean | nucleus | 28.17 | 27.35 |
| KRH70746 | Soybean | nucleus, plastid | 28.39 | 27.22 |
| KRG89621 | Soybean | nucleus | 28.17 | 27.18 |
| EES02731 | Sorghum | nucleus | 32.69 | 27.14 |
| KRH74885 | Soybean | nucleus | 27.74 | 26.93 |
| CDY50735 | Canola | extracellular | 21.08 | 26.92 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 21.08 | 26.34 |
| AT1G69570.1 | Thale cress | nucleus | 22.37 | 26.07 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 10.75 | 25.51 |
| CDY50734 | Canola | nucleus | 14.62 | 25.09 |
| Zm00001d040362_P001 | Maize | nucleus | 30.54 | 24.83 |
| GSMUA_Achr2P13350_001 | Banana | nucleus | 12.04 | 24.14 |
| GSMUA_Achr10P... | Banana | nucleus | 10.75 | 21.93 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 10.32 | 21.43 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 10.32 | 20.51 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 8.6 | 16.74 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G11520_001 | EnsemblPlants:GSMUA_Achr2P11520_001 | EnsemblPlants:GSMUA_Achr2T11520_001 |
| InterPro:IPR003851 | UniProt:M0S743 | PFAM:PD007478 | PFAM:PF02701 | PFscan:PS50884 | PANTHER:PTHR31089 |
| PANTHER:PTHR31089:SF15 | UniParc:UPI000296B498 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G11520_001]
Coordinates
chr2:-:14340115..14346861
Molecular Weight (calculated)
52235.4 Da
IEP (calculated)
8.806
GRAVY (calculated)
-0.628
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLPVNAEGG VPGAKSGPGD FRLELDWIKA PRIQRFVYNP FVFILMRSLK YATELILQDN YLYYFDIMFQ DASKEVTNVQ VNDISAAAPD EEDEGSPISS
101: SSLTSSNEED GKTSIADEKK AVKNTVEDTK TEVDCSGPEK VLKKPDKILP CPRCNSMGTK FFYYNNYNVN QPRHFCKNCQ RYWTAGGTMR NVPFGAGRRK
201: RKSITRHADS GSTICQESRE EPSRASSAAA SNILENGSAE NAIHKQQSGM HVYCNGLAPL TQLQCYPESS WSYPWRPAWS NVAAMEAGRF WGFTTWSNGT
301: WNIPWVGSNS GFISSSSSSS GSGCSGNDSP MLGKHSRDAT LQSEEKTEKS IWVPKTLRIG DPEFNMGCPR YQALYRRFLR EKLTAKVACA SHEAIRGKDQ
401: DCQHHLRLFR NPCCKYEKKV FVSKFLLQRK FIISSAVTGL ANQQRKIQLI NVEQKEWLRN SSTES
101: SSLTSSNEED GKTSIADEKK AVKNTVEDTK TEVDCSGPEK VLKKPDKILP CPRCNSMGTK FFYYNNYNVN QPRHFCKNCQ RYWTAGGTMR NVPFGAGRRK
201: RKSITRHADS GSTICQESRE EPSRASSAAA SNILENGSAE NAIHKQQSGM HVYCNGLAPL TQLQCYPESS WSYPWRPAWS NVAAMEAGRF WGFTTWSNGT
301: WNIPWVGSNS GFISSSSSSS GSGCSGNDSP MLGKHSRDAT LQSEEKTEKS IWVPKTLRIG DPEFNMGCPR YQALYRRFLR EKLTAKVACA SHEAIRGKDQ
401: DCQHHLRLFR NPCCKYEKKV FVSKFLLQRK FIISSAVTGL ANQQRKIQLI NVEQKEWLRN SSTES
001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
Arabidopsis Description
CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.