Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G185500.2 | Wheat | nucleus | 97.4 | 97.58 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 95.36 | 95.36 |
| EES02731 | Sorghum | nucleus | 71.24 | 68.57 |
| Os01t0264000-01 | Rice | nucleus | 61.78 | 67.14 |
| Zm00001d040362_P001 | Maize | nucleus | 66.05 | 62.24 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 37.29 | 61.28 |
| TraesCS2B01G118000.1 | Wheat | nucleus | 35.44 | 39.87 |
| TraesCS4B01G286400.1 | Wheat | nucleus | 29.31 | 36.49 |
| KRH74885 | Soybean | nucleus | 31.73 | 35.7 |
| KRH70746 | Soybean | nucleus, plastid | 31.91 | 35.46 |
| KRH50577 | Soybean | nucleus | 31.35 | 35.28 |
| KRG89621 | Soybean | nucleus | 31.17 | 34.85 |
| CDX95919 | Canola | nucleus | 23.19 | 33.97 |
| CDY01768 | Canola | nucleus | 23.19 | 33.97 |
| CDY67869 | Canola | nucleus | 24.12 | 33.77 |
| Bra024683.1-P | Field mustard | nucleus | 20.22 | 33.33 |
| CDY16193 | Canola | nucleus | 20.22 | 33.33 |
| CDY72477 | Canola | nucleus | 22.63 | 33.15 |
| Bra004396.1-P | Field mustard | nucleus | 22.63 | 33.15 |
| Bra003994.1-P | Field mustard | nucleus | 23.38 | 32.64 |
| CDY07344 | Canola | nucleus | 23.38 | 32.64 |
| AT1G69570.1 | Thale cress | nucleus | 24.12 | 32.58 |
| TraesCS1B01G347400.1 | Wheat | plastid | 12.62 | 32.54 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 27.46 | 31.83 |
| TraesCS3B01G329700.1 | Wheat | nucleus | 11.69 | 30.88 |
| CDY44994 | Canola | nucleus | 15.4 | 30.74 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 20.78 | 30.11 |
| CDY50735 | Canola | extracellular | 19.67 | 29.12 |
| Bra016286.1-P | Field mustard | nucleus | 17.81 | 28.66 |
| CDY46443 | Canola | nucleus | 17.63 | 28.36 |
| TraesCS2B01G592600.1 | Wheat | nucleus | 9.46 | 27.42 |
| TraesCS3B01G305400.1 | Wheat | nucleus | 7.79 | 27.27 |
| CDY50734 | Canola | nucleus | 13.17 | 26.2 |
| TraesCS2B01G592900.1 | Wheat | nucleus | 10.02 | 26.09 |
| TraesCS2B01G592800.1 | Wheat | nucleus, plastid | 9.83 | 25.0 |
| TraesCS2B01G592700.1 | Wheat | nucleus | 10.02 | 24.32 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 10.2 | 23.91 |
| TraesCS4B01G081500.1 | Wheat | nucleus | 10.95 | 22.26 |
| TraesCS5B01G249800.1 | Wheat | nucleus | 10.95 | 21.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G210300.1 | EnsemblPlantsGene:TraesCS3B01G210300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31089 | PFAM:PD007478 | PFAM:PF02701 | PFscan:PS50884 |
| ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:246160462..246163673
Molecular Weight (calculated)
58137.4 Da
IEP (calculated)
4.899
GRAVY (calculated)
-0.806
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQMDSGIK LFGRVIPLVP DAAPGPPEAE ATAGSEHPPP PPPPASEAEP EADNNKEQHK ETEDKGDSEM KVDAPEEKED SAMKGDEPRE RKDNEMEVDA
101: PQAKENAETA SSSTLDHKKD DQAQISNTEE KAASDPKEEN EKKSNDESGQ VKVLKKPDKI IPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGS
201: MRNVPVGAGR RKSKNSALHY RQLLMAPDCL LGSRVHISNT VNPEVLASLP SIPTQSASRS ETVLKFGPEV PLCESMVSVL NIEEQNVTNA GSVPRDETRE
301: DNSCTSSTTS NNGLPANAVL PGQNGAPVYC NGVGPVPQYY LGAPFMYPWS MGWNNLPVMV PGGSMPESAS PSESCSTSSA PWMNSPMMPG SRLPAPPFPY
401: PLVPPALWGC LPNWPAAAWN TPWIGTNGCI SPSGSSNSSC SGNGSPTLGK HSRDSNPQKD DKEEKSLWVP KTLRIDDPDE AAKSSIWATL GIKPGDPGAF
501: KPFQFKGESK GQPADARPAR ALQANPAAFS RSQSFQESS
101: PQAKENAETA SSSTLDHKKD DQAQISNTEE KAASDPKEEN EKKSNDESGQ VKVLKKPDKI IPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGS
201: MRNVPVGAGR RKSKNSALHY RQLLMAPDCL LGSRVHISNT VNPEVLASLP SIPTQSASRS ETVLKFGPEV PLCESMVSVL NIEEQNVTNA GSVPRDETRE
301: DNSCTSSTTS NNGLPANAVL PGQNGAPVYC NGVGPVPQYY LGAPFMYPWS MGWNNLPVMV PGGSMPESAS PSESCSTSSA PWMNSPMMPG SRLPAPPFPY
401: PLVPPALWGC LPNWPAAAWN TPWIGTNGCI SPSGSSNSSC SGNGSPTLGK HSRDSNPQKD DKEEKSLWVP KTLRIDDPDE AAKSSIWATL GIKPGDPGAF
501: KPFQFKGESK GQPADARPAR ALQANPAAFS RSQSFQESS
001: MADPAIKLFG KTIPLPELGV VDSSSSYTGF LTETQIPVRL SDSCTGDDDD EEMGDSGLGR EEGDDVGDGG GESETDKKEE KDSECQEESL RNESNDVTTT
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
101: TSGITEKTET TKAAKTNEES GGTACSQEGK LKKPDKILPC PRCNSMETKF CYYNNYNVNQ PRHFCKKCQR YWTAGGTMRN VPVGAGRRKN KSPASHYNRH
201: VSITSAEAMQ KVARTDLQHP NGANLLTFGS DSVLCESMAS GLNLVEKSLL KTQTVLQEPN EGLKITVPLN QTNEEAGTVS PLPKVPCFPG PPPTWPYAWN
301: GVSWTILPFY PPPAYWSCPG VSPGAWNSFT WMPQPNSPSG SNPNSPTLGK HSRDENAAEP GTAFDETESL GREKSKPERC LWVPKTLRID DPEEAAKSSI
401: WETLGIKKDE NADTFGAFRS STKEKSSLSE GRLPGRRPEL QANPAALSRS ANFHESS
Arabidopsis Description
CDF2Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.