Factsheet for Zm00001d040362_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02731	Sorghum	nucleus	82.17	83.93
TraesCS3A01G180600.1	Wheat	nucleus	62.24	66.05
TraesCS3B01G210300.1	Wheat	nucleus	62.24	66.05
TraesCS3D01G185500.2	Wheat	nucleus	61.89	65.8
GSMUA_Achr9P05020_001	Banana	nucleus	35.49	61.89
Os01t0264000-01	Rice	nucleus	52.62	60.69
Zm00001d022525_P001	Maize	nucleus	33.92	37.67
KRH74885	Soybean	nucleus	30.24	36.12
Zm00001d027846_P001	Maize	nucleus	27.27	36.11
KRH70746	Soybean	nucleus, plastid	30.24	35.67
KRH50577	Soybean	nucleus	29.72	35.49
Zm00001d040455_P001	Maize	nucleus	30.94	34.5
KRG89621	Soybean	nucleus	29.02	34.44
CDY01768	Canola	nucleus	22.03	34.24
CDX95919	Canola	nucleus	21.85	33.97
CDY16193	Canola	nucleus	19.23	33.64
Bra024683.1-P	Field mustard	nucleus	19.23	33.64
Zm00001d012703_P001	Maize	nucleus	13.11	33.63
Zm00001d032999_P001	Maize	nucleus	26.22	33.33
CDY72477	Canola	nucleus	21.33	33.15
Bra004396.1-P	Field mustard	nucleus	21.33	33.15
CDY67869	Canola	nucleus	22.2	32.99
CDY07344	Canola	nucleus	22.2	32.9
Bra003994.1-P	Field mustard	nucleus	22.2	32.9
AT1G69570.1	Thale cress	nucleus	22.73	32.58
Zm00001d038693_P001	Maize	nucleus	12.94	32.03
GSMUA_Achr2P11520_001	Banana	nucleus	24.83	30.54
AT1G26790.1	Thale cress	nucleus, plastid	19.58	30.11
Zm00001d014198_P001	Maize	nucleus	22.73	29.95
CDY44994	Canola	nucleus	13.99	29.63
CDY50735	Canola	extracellular	18.71	29.4
Zm00001d010740_P001	Maize	nucleus	10.84	29.25
Zm00001d043402_P001	Maize	nucleus	12.76	28.08
CDY50734	Canola	nucleus	13.29	28.04
Bra016286.1-P	Field mustard	nucleus	16.26	27.76
CDY46443	Canola	nucleus	16.08	27.46
Zm00001d001824_P001	Maize	nucleus	9.44	26.47
Zm00001d026628_P001	Maize	nucleus, plastid	9.62	26.07
Zm00001d031278_P001	Maize	nucleus	10.84	25.83
Zm00001d005970_P001	Maize	nucleus	9.97	23.36
Zm00001d020837_P001	Maize	nucleus	10.49	22.64
Zm00001d039482_P001	Maize	nucleus	8.92	22.08
Zm00001d043904_P001	Maize	nucleus	8.74	21.83
Zm00001d033325_P001	Maize	nucleus, plastid	11.36	20.7
Zm00001d013724_P001	Maize	nucleus	11.19	19.1
Zm00001d024790_P001	Maize	nucleus	8.04	18.78

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1D6MQD3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851
ProteinID:ONM31223.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31089
PANTHER:PTHR31089:SF1	UniParc:UPI000842C780	EnsemblPlantsGene:Zm00001d040362	EnsemblPlants:Zm00001d040362_P001	EnsemblPlants:Zm00001d040362_T001	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

C2C2-Dof-transcription factor 6Dof-type zinc finger DNA-binding family protein

Coordinates

chr3:+:40080595..40084385

Molecular Weight (calculated)

62060.3 Da

IEP (calculated)

5.053

GRAVY (calculated)

-0.876

Length

572 amino acids

Sequence
(BLAST)

001: MSDQKDPGIK LFGRVIPWGP ETAPGTTEVE DPPQDELQPR APEVAAAVDE DQHNEKEEKN ANEMVVMPQE KGKETKVDTP QQEKGNEMEV DAPQKEHDDE
101: MKIDAQQEEK DEQMEAVASP THGYIEPANL PPSESEHKKG DEGPMDSAED KAASDAKGQN EKTSNEESGQ DRALNKKPDK ILPCPRCNSM DTKFCYYNNY
201: NVNQPRHFCK NCQRYWTAGG TMRNVPVGAG RRKSKNASLH YRQLLMAPDC MLGPRVDISK PVLPEGLASS PPAPTQPASR NGTVLKFGHE VPFCESMVSA
301: LNIDEQNGNS PGGPTARGEN REDNNNPGSG TPPYNGVPET MAPVVGKNGA PVHCNGVAPV PQYYLGTPFM YPWNVGWSNV PVMVPGKSMP EPAPAPESCS
401: TSSAVWMNPP MMPGSRPPPS PAFPYPLVPP GLWGCFSGWP ATAWNVPWTR TNVCVSPPPP PPLSPSPSSN SSSCSGNGSP TLGKHSRDTN PLREEKREKS
501: LWVPKTLRID DPDDAAKSSI WATLGIKPGD PGTFIKPFQS KVESKGQRSD AAQVLQANPA AMSRSQSFQE SS

Best Arabidopsis Sequence Match ( AT3G47500.1 )
(BLAST)

001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI

Arabidopsis Description

CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.