Factsheet for Zm00001d001824_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13107	Sorghum	nucleus	82.35	75.0
Zm00001d026628_P001	Maize	nucleus, plastid	75.98	73.46
Os04t0678400-01	Rice	plastid	66.18	65.53
TraesCS2D01G563000.1	Wheat	nucleus, plastid	57.35	53.92
TraesCS2B01G592600.1	Wheat	nucleus	49.02	53.76
TraesCS2A01G590700.1	Wheat	nucleus	52.45	53.23
TraesCS2A01G591100.1	Wheat	nucleus, plastid	54.41	52.61
TraesCS2B01G592800.1	Wheat	nucleus, plastid	54.41	52.36
TraesCS2D01G563400.1	Wheat	nucleus	52.94	52.17
TraesCS2B01G592900.1	Wheat	nucleus	51.96	51.21
TraesCS2D01G563200.1	Wheat	plastid	54.9	50.68
HORVU2Hr1G119110.3	Barley	nucleus	52.45	50.23
TraesCS2A01G591200.1	Wheat	nucleus, plastid	52.45	50.0
TraesCS2B01G592700.1	Wheat	nucleus	54.41	50.0
TraesCS2A01G590800.1	Wheat	plastid	53.43	49.77
TraesCS2D01G563100.1	Wheat	nucleus	51.96	47.11
HORVU2Hr1G119160.3	Barley	nucleus, plastid	47.55	46.63
TraesCS2A01G591000.1	Wheat	mitochondrion, nucleus	53.43	43.78
Zm00001d039482_P001	Maize	nucleus	29.41	25.97
GSMUA_Achr6P29500_001	Banana	nucleus	24.02	20.5
Zm00001d010740_P001	Maize	nucleus	20.1	19.34
Zm00001d038693_P001	Maize	nucleus	21.57	19.05
Zm00001d012703_P001	Maize	nucleus	20.59	18.83
Zm00001d043904_P001	Maize	nucleus	19.61	17.47
Zm00001d043402_P001	Maize	nucleus	22.06	17.31
Zm00001d005970_P001	Maize	nucleus	20.59	17.21
Zm00001d024790_P001	Maize	nucleus	20.59	17.14
Zm00001d031278_P001	Maize	nucleus	20.1	17.08
Zm00001d020837_P001	Maize	nucleus	20.59	15.85
Zm00001d033325_P001	Maize	nucleus, plastid	24.02	15.61
Zm00001d013724_P001	Maize	nucleus	24.02	14.63
Zm00001d027846_P001	Maize	nucleus	24.02	11.34
Zm00001d032999_P001	Maize	nucleus	23.53	10.67
Zm00001d014198_P001	Maize	nucleus	21.08	9.91
Zm00001d040455_P001	Maize	nucleus	24.51	9.75
Zm00001d040362_P001	Maize	nucleus	26.47	9.44
Zm00001d022525_P001	Maize	nucleus	22.55	8.93

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A1D6DT60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	ProteinID:ONM12077.1
PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF31
UniParc:UPI000842AE4B	EnsemblPlantsGene:Zm00001d001824	EnsemblPlants:Zm00001d001824_P001	EnsemblPlants:Zm00001d001824_T001	InterPro:Znf_Dof	SEG:seg

Description

Dof zinc finger protein DOF1.6

Coordinates

chr2:+:1527403..1528307

Molecular Weight (calculated)

21686.1 Da

IEP (calculated)

8.125

GRAVY (calculated)

-0.491

Length

204 amino acids

Sequence
(BLAST)

001: MAPAVSILSA TASAKRKRPA TSDADELPHD DSSAPHQQVQ GQGQQPRQQQ QLECPRCRST NTKFCYYNNY STAQPRHFCR ACRRYWTHGG TLRDVPVGGA
101: SRRAATGGGG GKRRRVSAEP SSPPPSVADA CLPSAFPFLS DGSFFPQLDL VGGVALAPPA FSSSWQSVLV PDLYDGLAPW DDGATAAAWG DIGGLDLSWT
201: LPGN

Best Arabidopsis Sequence Match ( AT5G66940.1 )
(BLAST)

001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA

Arabidopsis Description

DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.