Factsheet for HORVU2Hr1G119110.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G591200.1	Wheat	nucleus, plastid	80.28	79.91
TraesCS2B01G592600.1	Wheat	nucleus	69.48	79.57
TraesCS2D01G563000.1	Wheat	nucleus, plastid	79.34	77.88
TraesCS2A01G591100.1	Wheat	nucleus, plastid	76.06	76.78
TraesCS2B01G592700.1	Wheat	nucleus	77.46	74.32
HORVU2Hr1G119160.3	Barley	nucleus, plastid	69.01	70.67
TraesCS2D01G563100.1	Wheat	nucleus	74.65	70.67
TraesCS2A01G591000.1	Wheat	mitochondrion, nucleus	77.93	66.67
Zm00001d001824_P001	Maize	nucleus	50.23	52.45
Os04t0678400-01	Rice	plastid	47.42	49.03
Zm00001d026628_P001	Maize	nucleus, plastid	47.89	48.34
EES13107	Sorghum	nucleus	50.7	48.21
GSMUA_Achr6P29500_001	Banana	nucleus	29.58	26.36
HORVU3Hr1G061840.2	Barley	nucleus, plastid	17.84	22.75
HORVU3Hr1G072970.1	Barley	nucleus	20.66	21.78
HORVU4Hr1G013890.1	Barley	nucleus	24.41	19.48
HORVU1Hr1G076800.1	Barley	nucleus	20.66	18.88
HORVU4Hr1G074990.1	Barley	nucleus	27.23	13.12
HORVU2Hr1G017290.1	Barley	nucleus	23.0	10.32

Protein Annotations

MapMan:15.5.1.5	EMBL:AK376848	UniProt:F2EL20	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G119110
EnsemblPlants:HORVU2Hr1G119110.3	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF31	UniParc:UPI0002009116	InterPro:Znf_Dof	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EL20]

Coordinates

chrchr2H:-:744388940..744390977

Molecular Weight (calculated)

22703.2 Da

IEP (calculated)

6.991

GRAVY (calculated)

-0.699

Length

213 amino acids

Sequence
(BLAST)

001: MAPASASVVP AATSNAGAKR TADAHDPDAA EHPLQQEGAV TKKNVQSQQQ PQPKLECPRC SSSDTKFCYY NNYSTAQPRH YCRTCRRYWT HGGTLRKVPV
101: GGACRRGSGS SNKRRRSSAE PHTPSSDSPA PQPDLQETLA PLPAFPFLTD GGPVFLPQFD LGLGGFPWTT PAATDNLYDG LAPWDGCLAP TGASEDFGGL
201: ELSWPPPPPP AES

Best Arabidopsis Sequence Match ( AT5G66940.1 )
(BLAST)

001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA

Arabidopsis Description

DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.