Factsheet for TraesCS2A01G591000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G563100.1	Wheat	nucleus	86.75	96.0
TraesCS2B01G592600.1	Wheat	nucleus	64.26	86.02
TraesCS2A01G591200.1	Wheat	nucleus, plastid	73.09	85.05
TraesCS2A01G591100.1	Wheat	nucleus, plastid	71.49	84.36
TraesCS2A01G590700.1	Wheat	nucleus	66.27	82.09
HORVU2Hr1G119110.3	Barley	nucleus	66.67	77.93
TraesCS2A01G590800.1	Wheat	plastid	65.86	74.89
HORVU2Hr1G119160.3	Barley	nucleus, plastid	60.64	72.6
Zm00001d001824_P001	Maize	nucleus	43.78	53.43
Zm00001d026628_P001	Maize	nucleus, plastid	43.37	51.18
Os04t0678400-01	Rice	plastid	41.37	50.0
EES13107	Sorghum	nucleus	44.98	50.0
TraesCS3A01G271700.1	Wheat	nucleus	17.27	27.74
TraesCS3A01G106500.1	Wheat	nucleus	26.1	27.31
GSMUA_Achr6P29500_001	Banana	nucleus	23.29	24.27
TraesCS1A01G334100.1	Wheat	nucleus, plastid	19.28	22.97
TraesCS3A01G306800.1	Wheat	nucleus	18.47	22.77
TraesCS4A01G234000.1	Wheat	nucleus	22.49	21.05
TraesCS5A01G251800.1	Wheat	nucleus	20.88	18.51
TraesCS4A01G017700.1	Wheat	nucleus	22.89	13.04
TraesCS3A01G189600.1	Wheat	nucleus	20.48	10.71
TraesCS2A01G100800.1	Wheat	nucleus	20.48	10.65
TraesCS3A01G180600.1	Wheat	nucleus	21.69	10.02

Protein Annotations

EnsemblPlants:TraesCS2A01G591000.1	EnsemblPlantsGene:TraesCS2A01G591000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF31	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr2A:+:778827263..778828012

Molecular Weight (calculated)

26582.9 Da

IEP (calculated)

7.956

GRAVY (calculated)

-0.681

Length

249 amino acids

Sequence
(BLAST)

001: MRCPARSPAR HSMAPASASL LPVAGAKRPF AADSAPDAAE QEQEEQLAQV SLCSLLTLSQ SGKQGGDQEG AASKKNGHGH GQSQQQPPKL ECPRCSSTDT
101: KFCYYNNYST AQPRHYCRTC RRYWTHGGTL RKVPVGGACR RRSGSGKRRR SSAEPHTPSS DSPPPPQPEQ QDTLPPLPVF PFLTDGGPVF LPQFDLGLAG
201: FPWTTPTATE HLYDGLGAPW GGCDGALAPT GAWDDFGGLE LTWPLAAGN

Best Arabidopsis Sequence Match ( AT5G60850.1 )
(BLAST)

001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP

Arabidopsis Description

DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.