Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G125100.1 | Wheat | nucleus | 92.02 | 95.22 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 92.02 | 95.22 |
| Zm00001d039482_P001 | Maize | nucleus | 48.32 | 49.78 |
| KXG31638 | Sorghum | nucleus | 44.96 | 45.53 |
| VIT_07s0255g00020.t01 | Wine grape | nucleus | 30.25 | 32.73 |
| PGSC0003DMT400034111 | Potato | nucleus | 26.47 | 32.47 |
| CDY52832 | Canola | nucleus | 30.25 | 32.43 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 23.53 | 32.37 |
| Bra036082.1-P | Field mustard | nucleus | 29.83 | 31.98 |
| VIT_18s0001g11310.t01 | Wine grape | nucleus | 30.25 | 31.86 |
| CDY54696 | Canola | nucleus | 31.51 | 31.51 |
| Bra030010.1-P | Field mustard | nucleus | 31.09 | 31.49 |
| CDX83127 | Canola | nucleus | 31.09 | 31.49 |
| Bra012901.1-P | Field mustard | nucleus | 31.93 | 31.41 |
| Solyc02g065290.1.1 | Tomato | nucleus | 26.47 | 31.03 |
| CDY17783 | Canola | nucleus | 29.83 | 31.0 |
| CDY02086 | Canola | nucleus | 31.51 | 30.99 |
| CDY18628 | Canola | nucleus | 27.31 | 30.66 |
| Bra037135.1-P | Field mustard | nucleus | 27.31 | 30.66 |
| Solyc04g079570.1.1 | Tomato | nucleus | 30.67 | 30.54 |
| PGSC0003DMT400030496 | Potato | nucleus | 24.79 | 30.1 |
| CDY20892 | Canola | nucleus | 26.05 | 30.1 |
| CDY23010 | Canola | nucleus | 31.09 | 29.96 |
| TraesCS2A01G590700.1 | Wheat | nucleus | 25.21 | 29.85 |
| AT5G66940.1 | Thale cress | nucleus | 28.15 | 29.78 |
| AT1G47655.1 | Thale cress | nucleus | 26.05 | 29.67 |
| PGSC0003DMT400026137 | Potato | nucleus | 29.83 | 29.58 |
| CDY01450 | Canola | nucleus | 27.31 | 29.55 |
| KRH70017 | Soybean | nucleus | 28.99 | 29.49 |
| AT3G50410.1 | Thale cress | nucleus | 31.09 | 29.25 |
| CDY58082 | Canola | nucleus | 25.21 | 29.13 |
| Bra012119.1-P | Field mustard | nucleus | 26.89 | 29.09 |
| TraesCS2A01G591200.1 | Wheat | nucleus, plastid | 26.05 | 28.97 |
| TraesCS2A01G591100.1 | Wheat | nucleus, plastid | 25.63 | 28.91 |
| KRH08373 | Soybean | nucleus | 28.57 | 28.81 |
| CDY12790 | Canola | nucleus | 26.47 | 28.77 |
| CDX81350 | Canola | nucleus | 26.89 | 28.57 |
| CDY17009 | Canola | nucleus | 26.89 | 27.83 |
| Bra015609.1-P | Field mustard | nucleus | 26.05 | 27.8 |
| TraesCS2A01G590800.1 | Wheat | plastid | 25.21 | 27.4 |
| Solyc02g090220.2.1 | Tomato | nucleus | 29.41 | 27.13 |
| TraesCS2A01G591000.1 | Wheat | mitochondrion, nucleus | 27.31 | 26.1 |
| TraesCS3A01G271700.1 | Wheat | nucleus | 15.97 | 24.52 |
| TraesCS1A01G334100.1 | Wheat | nucleus, plastid | 21.43 | 24.4 |
| TraesCS3A01G306800.1 | Wheat | nucleus | 20.17 | 23.76 |
| TraesCS4A01G234000.1 | Wheat | nucleus | 21.85 | 19.55 |
| TraesCS5A01G251800.1 | Wheat | nucleus | 20.17 | 17.08 |
| TraesCS4A01G017700.1 | Wheat | nucleus | 22.27 | 12.13 |
| TraesCS2A01G100800.1 | Wheat | nucleus | 22.69 | 11.27 |
| TraesCS3A01G189600.1 | Wheat | nucleus | 21.43 | 10.71 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 23.11 | 10.2 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G106500.1 | EnsemblPlantsGene:TraesCS3A01G106500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PFAM:PD007478 | PFAM:PF02701 | PFscan:PS50884 |
| ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:70730050..70730766
Molecular Weight (calculated)
25316.3 Da
IEP (calculated)
9.360
GRAVY (calculated)
-0.221
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRITAMDQL EAEEVVVRAP AASGGVRRAG EPERLAQCPC PRCESTDTKF CYYNNYNLSQ PRHFCRGCRR YWTRGGALRN VPVGGGTRKP NGSPAAVRRK
101: RPSHSHSHSH HAVPAAAASQ AAPVVPLSVS APAPLPLPLL QPQPQPQPQQ YELTFLPASL SAVDPDRRLL DLGGSFSSLL APPAPLLPNF ATSFVFGGAG
201: AGMAMAHAHV PALPQPAPVA SQALPESFWG MGWPDLSI
101: RPSHSHSHSH HAVPAAAASQ AAPVVPLSVS APAPLPLPLL QPQPQPQPQQ YELTFLPASL SAVDPDRRLL DLGGSFSSLL APPAPLLPNF ATSFVFGGAG
201: AGMAMAHAHV PALPQPAPVA SQALPESFWG MGWPDLSI
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.