Factsheet for Bra036082.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52832	Canola	nucleus	99.1	99.1
CDY17783	Canola	nucleus	92.79	89.96
Bra030010.1-P	Field mustard	nucleus	77.03	72.77
Bra012901.1-P	Field mustard	nucleus	77.93	71.49
AT3G50410.1	Thale cress	nucleus	76.13	66.8
Bra037135.1-P	Field mustard	nucleus	50.0	52.36
Bra012119.1-P	Field mustard	nucleus	51.8	52.27
KRH70017	Soybean	nucleus	51.35	48.72
KRH08373	Soybean	nucleus	50.9	47.88
Bra031269.1-P	Field mustard	nucleus	31.98	37.17
Bra030124.1-P	Field mustard	nucleus	20.27	36.89
Bra015609.1-P	Field mustard	nucleus	36.04	35.87
Bra030423.1-P	Field mustard	nucleus	28.83	34.59
Bra001822.1-P	Field mustard	nucleus	31.08	33.66
Bra023888.1-P	Field mustard	nucleus	30.18	33.5
Bra014297.1-P	Field mustard	nucleus	30.18	33.5
TraesCS3D01G108600.1	Wheat	nucleus	32.88	31.74
TraesCS3B01G125100.1	Wheat	nucleus	32.43	31.3
Zm00001d039482_P001	Maize	nucleus	31.08	29.87
TraesCS3A01G106500.1	Wheat	nucleus	31.98	29.83
KXG31638	Sorghum	nucleus	31.53	29.79
Bra032292.1-P	Field mustard	nucleus	22.07	28.0
Bra010848.1-P	Field mustard	nucleus	20.72	26.29
Bra021895.1-P	Field mustard	nucleus	18.92	25.0
Bra011800.1-P	Field mustard	nucleus, plastid	26.58	24.38
Bra029261.1-P	Field mustard	nucleus	26.13	19.86
Bra010082.1-P	Field mustard	nucleus	23.87	19.78
Bra024683.1-P	Field mustard	nucleus	27.48	18.65
Bra016286.1-P	Field mustard	nucleus	25.23	16.72
Bra003994.1-P	Field mustard	nucleus	27.03	15.54
Bra004396.1-P	Field mustard	nucleus	25.68	15.49
Bra018141.1-P	Field mustard	nucleus	29.73	15.46
Bra028437.1-P	Field mustard	nucleus	25.68	14.25
Bra025655.1-P	Field mustard	nucleus	26.58	13.26

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra036082	EnsemblPlants:Bra036082.1	EnsemblPlants:Bra036082.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4F4S8	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF12	UniParc:UPI0002542BDB	InterPro:Znf_Dof	SEG:seg	:

Description

AT3G50410 (E=1e-051) OBP1 | OBP1 (OBF BINDING PROTEIN 1); DNA binding / protein binding / transcription factor

Coordinates

chrA09:+:25172405..25173073

Molecular Weight (calculated)

23904.7 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.518

Length

222 amino acids

Sequence
(BLAST)

001: MMMSDSGEPR QIAMRPHGVI TGLPPTANEQ QEQLPCPRCN SSNTKFCYYN NYNFSQPRHF CKSCRRYWTH GGTLRDIPVG GGTRKSAKRS RTCSSSSSGT
101: RTTSVPLPAT PVLFPHSSTS NGVSHTVTAP LENDGKGNAL SLSGNFTSLL NQNNAGSSFD DVSFALGRAV WPFPTVGDSA TTNVPGVAVP YTWQFEGLES
201: SNAGEYFAWP DLSITTPGNS LK

Best Arabidopsis Sequence Match ( AT3G50410.1 )
(BLAST)

001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK

Arabidopsis Description

DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.