Factsheet for Bra023888.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
nucleus 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37299	Canola	nucleus	99.5	99.5
CDY69021	Canola	nucleus	92.5	93.91
Bra031269.1-P	Field mustard	nucleus	82.5	86.39
Bra001822.1-P	Field mustard	nucleus	88.5	86.34
AT3G21270.1	Thale cress	nucleus	81.0	79.41
Bra014297.1-P	Field mustard	nucleus	58.5	58.5
Bra030423.1-P	Field mustard	nucleus	51.0	55.14
GSMUA_Achr7P09590_001	Banana	nucleus	47.0	47.96
KRH47156	Soybean	nucleus	49.0	46.45
KRH09992	Soybean	nucleus	47.5	45.02
KRH23341	Soybean	nucleus	47.0	44.34
KRH44186	Soybean	nucleus	47.0	44.13
VIT_09s0002g02490.t01	Wine grape	nucleus	45.0	41.67
GSMUA_Achr10P...	Banana	nucleus	46.5	40.79
GSMUA_Achr2P15700_001	Banana	nucleus	43.5	38.84
Bra030124.1-P	Field mustard	nucleus	22.5	36.89
GSMUA_Achr4P30860_001	Banana	nucleus	41.0	35.04
Bra015609.1-P	Field mustard	nucleus	34.5	30.94
Bra036082.1-P	Field mustard	nucleus	33.5	30.18
Bra012901.1-P	Field mustard	nucleus	34.5	28.51
Bra030010.1-P	Field mustard	nucleus	33.5	28.51
Bra037135.1-P	Field mustard	nucleus	29.5	27.83
Bra012119.1-P	Field mustard	nucleus	29.0	26.36
Bra032292.1-P	Field mustard	nucleus	23.0	26.29
Bra021895.1-P	Field mustard	nucleus	22.0	26.19
Bra010848.1-P	Field mustard	nucleus	22.5	25.71
Bra011800.1-P	Field mustard	nucleus, plastid	28.5	23.55
Bra010082.1-P	Field mustard	nucleus	23.5	17.54
Bra029261.1-P	Field mustard	nucleus	25.5	17.47
Bra024683.1-P	Field mustard	nucleus	24.0	14.68
Bra016286.1-P	Field mustard	nucleus	24.0	14.33
Bra004396.1-P	Field mustard	nucleus	26.0	14.13
Bra028437.1-P	Field mustard	nucleus	26.5	13.25
Bra003994.1-P	Field mustard	nucleus	25.5	13.21
Bra018141.1-P	Field mustard	nucleus	25.5	11.94
Bra025655.1-P	Field mustard	nucleus	26.5	11.91

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra023888	EnsemblPlants:Bra023888.1	EnsemblPlants:Bra023888.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4E534	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF23	UniParc:UPI000254454C	InterPro:Znf_Dof	SEG:seg	:

Description

AT3G21270 (E=1e-056) ADOF2 | ADOF2; DNA binding / transcription factor

Coordinates

chrA01:-:20829289..20829891

Molecular Weight (calculated)

21520.2 Da

IEP (calculated)

9.609

GRAVY (calculated)

-0.973

Length

200 amino acids

Sequence
(BLAST)

001: MQDPAAYYQS MMAKQQQQQP QFPVQEQLNC PRCDSPNTKF CYYNNYNLSQ PRHFCKSCRR YWTKGGALRN VPVGGGTRKN AKRSTSSPTS PSNNKKTKNT
101: DPDPNSQTGN KPDTDPTRML YGFPIGDQDV KGMEMGGGGG SFSSLLASNM QLGLGGIILD GSGWDPGMGL RRSEAGNGGG GGGGGGNPWT DLALNRVEKN

Best Arabidopsis Sequence Match ( AT3G21270.1 )
(BLAST)

001: MQDPAAYYQT MMAKQQQQQQ PQFAEQEQLK CPRCDSPNTK FCYYNNYNLS QPRHFCKSCR RYWTKGGALR NVPVGGGSRK NATKRSTSSS SSASSPSNSS
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN

Arabidopsis Description

DOF3.1DOF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VA07]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.