Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 84.69 | 72.81 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 76.53 | 66.96 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 70.41 | 58.97 |
| CDY56923 | Canola | nucleus | 46.94 | 49.46 |
| KRH47156 | Soybean | nucleus | 53.06 | 49.29 |
| CDY51457 | Canola | nucleus | 47.45 | 48.69 |
| Bra031269.1-P | Field mustard | nucleus | 46.94 | 48.17 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 52.04 | 47.22 |
| Bra023888.1-P | Field mustard | nucleus | 47.96 | 47.0 |
| Solyc03g121400.1.1 | Tomato | nucleus | 50.0 | 46.67 |
| CDY37299 | Canola | nucleus | 47.45 | 46.5 |
| KRH44186 | Soybean | nucleus | 50.51 | 46.48 |
| KRH09992 | Soybean | nucleus | 50.0 | 46.45 |
| PGSC0003DMT400006421 | Potato | nucleus | 48.98 | 46.15 |
| Bra001822.1-P | Field mustard | nucleus | 47.96 | 45.85 |
| CDY69021 | Canola | nucleus | 45.92 | 45.69 |
| CDY32420 | Canola | nucleus | 47.96 | 45.63 |
| CDY48879 | Canola | nucleus | 47.96 | 45.63 |
| AT3G21270.1 | Thale cress | nucleus | 47.45 | 45.59 |
| Solyc06g062520.1.1 | Tomato | nucleus | 44.39 | 45.31 |
| KRH23341 | Soybean | nucleus | 47.45 | 43.87 |
| AT1G51700.1 | Thale cress | nucleus | 43.37 | 43.81 |
| CDY43923 | Canola | nucleus | 35.2 | 42.86 |
| CDY52953 | Canola | nucleus | 42.35 | 42.78 |
| CDX87836 | Canola | nucleus | 39.29 | 42.31 |
| CDY46544 | Canola | nucleus | 42.86 | 42.0 |
| Bra030423.1-P | Field mustard | nucleus | 39.29 | 41.62 |
| Bra014297.1-P | Field mustard | nucleus | 42.35 | 41.5 |
| GSMUA_Achr2P09110_001 | Banana | nucleus | 21.94 | 36.13 |
| GSMUA_Achr4P15140_001 | Banana | nucleus | 22.96 | 30.2 |
| GSMUA_Achr2P13350_001 | Banana | nucleus | 34.18 | 28.88 |
| GSMUA_Achr4P08020_001 | Banana | nucleus | 21.94 | 28.48 |
| GSMUA_Achr9P06430_001 | Banana | nucleus | 20.92 | 26.62 |
| CDX75689 | Canola | nucleus, plastid | 32.65 | 26.45 |
| Bra011800.1-P | Field mustard | nucleus, plastid | 32.65 | 26.45 |
| CDX69349 | Canola | nucleus, plastid | 32.65 | 26.45 |
| AT4G38000.1 | Thale cress | nucleus, plastid | 32.14 | 25.61 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 26.02 | 21.34 |
| GSMUA_Achr11P... | Banana | nucleus | 25.0 | 20.25 |
| GSMUA_Achr6P10720_001 | Banana | nucleus | 25.51 | 18.32 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 26.53 | 17.22 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 28.57 | 17.07 |
| GSMUA_Achr2P22000_001 | Banana | nucleus | 29.08 | 15.08 |
| GSMUA_Achr10P... | Banana | nucleus | 27.04 | 14.85 |
| GSMUA_Achr3P01850_001 | Banana | nucleus | 26.02 | 14.74 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 29.08 | 14.65 |
| GSMUA_Achr11P... | Banana | nucleus | 29.59 | 13.78 |
| GSMUA_Achr11P... | Banana | nucleus | 29.59 | 12.45 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 25.51 | 10.75 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr7G09590_001 | EnsemblPlants:GSMUA_Achr7P09590_001 | EnsemblPlants:GSMUA_Achr7T09590_001 |
| InterPro:IPR003851 | UniProt:M0TG47 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI00029676DB | InterPro:Znf_Dof | SEG:seg | : |
Description
Dof zinc finger protein DOF1.7 [Source:GMGC_GENE;Acc:GSMUA_Achr7G09590_001]
Coordinates
chr7:+:7820354..7820944
Molecular Weight (calculated)
21391.7 Da
IEP (calculated)
8.367
GRAVY (calculated)
-0.758
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDSSAAAFQ AAKPQFPEQE QNLRCPRCDS TNTKFCYYNN YNLSQPRHFC KSCRRYWTKG GALRNIPVGG GTRKNSKRSN SYSSSAASNS KRPNPPKPPS
101: SLPDLPKPDP VSLTYPPLDP DRHLLDMTGS FSSLLASDGH FESFLGSFHP VNGGATALQN SSNSGNAITP MPAIENFERL EGDSGCWDAG WTDLAI
101: SLPDLPKPDP VSLTYPPLDP DRHLLDMTGS FSSLLASDGH FESFLGSFHP VNGGATALQN SSNSGNAITP MPAIENFERL EGDSGCWDAG WTDLAI
001: MQDPAAYYQT MMAKQQQQQQ PQFAEQEQLK CPRCDSPNTK FCYYNNYNLS QPRHFCKSCR RYWTKGGALR NVPVGGGSRK NATKRSTSSS SSASSPSNSS
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
Arabidopsis Description
DOF3.1DOF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VA07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.