Factsheet for AT4G38000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69349	Canola	nucleus, plastid	73.17	74.38
Bra011800.1-P	Field mustard	nucleus, plastid	73.17	74.38
CDX75689	Canola	nucleus, plastid	72.76	73.97
GSMUA_Achr7P09590_001	Banana	nucleus	25.61	32.14
Solyc06g062520.1.1	Tomato	nucleus	24.8	31.77
AT1G51700.1	Thale cress	nucleus	23.58	29.9
PGSC0003DMT400006421	Potato	nucleus	24.8	29.33
AT1G29160.1	Thale cress	nucleus	20.73	29.14
AT3G21270.1	Thale cress	nucleus	23.17	27.94
AT2G34140.1	Thale cress	nucleus	19.11	27.65
GSMUA_Achr10P...	Banana	nucleus	25.61	27.63
GSMUA_Achr4P30860_001	Banana	nucleus	24.8	26.07
AT1G47655.1	Thale cress	nucleus	21.54	25.36
AT5G66940.1	Thale cress	nucleus	22.76	24.89
GSMUA_Achr2P15700_001	Banana	nucleus	22.36	24.55
AT3G50410.1	Thale cress	nucleus	24.8	24.11
AT5G62430.1	Thale cress	nucleus	23.58	19.46
AT3G47500.1	Thale cress	nucleus	28.05	15.4
AT1G26790.1	Thale cress	nucleus, plastid	22.76	15.05
AT1G69570.1	Thale cress	nucleus	23.58	14.54
AT5G39660.1	Thale cress	nucleus	25.2	13.57

Protein Annotations

MapMan:15.5.1.5	EntrezGene:829956	UniProt:A0A178V5K8	ProteinID:AEE86862.1	EMBL:AK228613	ArrayExpress:AT4G38000
EnsemblPlantsGene:AT4G38000	RefSeq:AT4G38000	TAIR:AT4G38000	RefSeq:AT4G38000-TAIR-G	EnsemblPlants:AT4G38000.1	TAIR:AT4G38000.1
Unigene:At.2738	EMBL:BT005767	EMBL:BT006092	ProteinID:CAB37540.1	ProteinID:CAB80465.1	Symbol:DOF4.7
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009791	GO:GO:0009838	GO:GO:0009908	GO:GO:0009987	GO:GO:0010227	GO:GO:0045893
GO:GO:0046872	InterPro:IPR003851	RefSeq:NP_195513.2	ProteinID:OAP00948.1	PFAM:PD007478	PFAM:PF02701
PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009029	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0009067	PO:PO:0025022	ScanProsite:PS01361
PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF61	UniProt:Q0WQS4	UniProt:Q84K52	UniParc:UPI000000C72A
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

DOF4.7Dof zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q0WQS4]

Coordinates

chr4:+:17858351..17859325

Molecular Weight (calculated)

27395.2 Da

IEP (calculated)

9.681

GRAVY (calculated)

-0.678

Length

246 amino acids

Sequence
(BLAST)

001: MMTSSHQSNT TGFKPRRIKT TAKPPRQINN KEPSPATQPV LKCPRCDSVN TKFCYYNNYS LSQPRHYCKN CRRYWTRGGA LRNVPIGGST RNKNKPCSLQ
101: VISSPPLFSN GTSSASRELV RNHPSTAMMM MSSGGFSGYM FPLDPNFNLA SSSIESLSSF NQDLHQKLQQ QRLVTSMFLQ DSLPVNEKTV MFQNVELIPP
201: STVTTDWVFD RFATGGGATS GNHEDNDDGE GNLGNWFHNA NNNALL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.