Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71347 | Canola | nucleus | 70.29 | 93.18 |
| Bra030124.1-P | Field mustard | nucleus | 64.0 | 91.8 |
| CDX90171 | Canola | nucleus | 89.71 | 90.23 |
| CDX99791 | Canola | nucleus | 89.14 | 90.17 |
| CDY43321 | Canola | nucleus | 89.14 | 89.66 |
| Bra010848.1-P | Field mustard | nucleus | 89.14 | 89.14 |
| CDY50789 | Canola | nucleus | 88.57 | 88.57 |
| Bra032292.1-P | Field mustard | nucleus | 88.57 | 88.57 |
| CDY15647 | Canola | nucleus | 88.0 | 87.01 |
| AT2G34140.1 | Thale cress | nucleus | 78.86 | 81.18 |
| VIT_10s0003g01260.t01 | Wine grape | nucleus | 59.43 | 65.41 |
| KRH42862 | Soybean | nucleus | 28.0 | 62.82 |
| KRH58964 | Soybean | nucleus | 50.29 | 53.33 |
| Solyc02g076850.1.1 | Tomato | nucleus | 49.14 | 52.76 |
| KRH21283 | Soybean | nucleus | 44.0 | 52.38 |
| PGSC0003DMT400087458 | Potato | nucleus | 49.14 | 52.12 |
| KRH11011 | Soybean | nucleus | 44.0 | 50.33 |
| AT3G21270.1 | Thale cress | nucleus | 28.0 | 24.02 |
| AT1G51700.1 | Thale cress | nucleus | 26.29 | 23.71 |
| AT5G62430.1 | Thale cress | nucleus | 37.71 | 22.15 |
| AT1G47655.1 | Thale cress | nucleus | 26.29 | 22.01 |
| AT4G38000.1 | Thale cress | nucleus, plastid | 29.14 | 20.73 |
| AT3G50410.1 | Thale cress | nucleus | 29.14 | 20.16 |
| AT5G66940.1 | Thale cress | nucleus | 25.71 | 20.0 |
| AT1G69570.1 | Thale cress | nucleus | 40.57 | 17.79 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 37.71 | 17.74 |
| AT3G47500.1 | Thale cress | nucleus | 42.86 | 16.74 |
| AT5G39660.1 | Thale cress | nucleus | 40.57 | 15.54 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 41.14 | 15.13 |
| TraesCS3A01G189600.1 | Wheat | nucleus | 40.57 | 14.92 |
| Os01t0277500-01 | Rice | nucleus | 44.0 | 13.9 |
| Zm00001d040455_P001 | Maize | nucleus | 40.57 | 13.84 |
| EES00579 | Sorghum | nucleus | 40.0 | 13.67 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:839790 | UniProt:A0A178W0K9 | EMBL:AB493483 | EMBL:AC021043 | ProteinID:AEE31051.1 |
| ArrayExpress:AT1G29160 | EnsemblPlantsGene:AT1G29160 | RefSeq:AT1G29160 | TAIR:AT1G29160 | RefSeq:AT1G29160-TAIR-G | EnsemblPlants:AT1G29160.1 |
| TAIR:AT1G29160.1 | EMBL:BT029990 | UniProt:C0SUY0 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010214 |
| GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR003851 | RefSeq:NP_174211.1 | ProteinID:OAP12077.1 | UniProt:P68350 |
| PFAM:PD007478 | PFAM:PF02701 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF14 |
| UniParc:UPI0000162F08 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
Coordinates
chr1:-:10183390..10184512
Molecular Weight (calculated)
19424.1 Da
IEP (calculated)
9.582
GRAVY (calculated)
-0.649
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.