Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032292.1-P | Field mustard | nucleus | 97.69 | 96.57 |
| CDY50789 | Canola | nucleus | 97.69 | 96.57 |
| CDY71347 | Canola | nucleus | 69.36 | 90.91 |
| AT1G29160.1 | Thale cress | nucleus | 90.17 | 89.14 |
| CDY43321 | Canola | nucleus | 85.55 | 85.06 |
| CDX90171 | Canola | nucleus | 85.55 | 85.06 |
| CDY15647 | Canola | nucleus | 86.13 | 84.18 |
| CDY37670 | Canola | nucleus | 63.58 | 65.48 |
| VIT_10s0003g01260.t01 | Wine grape | nucleus | 60.12 | 65.41 |
| CDY67393 | Canola | nucleus | 63.58 | 64.71 |
| KRH42862 | Soybean | nucleus | 27.75 | 61.54 |
| KRH58964 | Soybean | nucleus | 50.87 | 53.33 |
| Solyc02g076850.1.1 | Tomato | nucleus | 49.71 | 52.76 |
| KRH21283 | Soybean | nucleus | 44.51 | 52.38 |
| PGSC0003DMT400087458 | Potato | nucleus | 49.71 | 52.12 |
| KRH11011 | Soybean | nucleus | 45.09 | 50.98 |
| CDY56923 | Canola | nucleus | 27.75 | 25.81 |
| CDY43923 | Canola | nucleus | 23.7 | 25.47 |
| CDY51457 | Canola | nucleus | 27.75 | 25.13 |
| CDY00286 | Canola | nucleus | 37.57 | 23.81 |
| CDY69084 | Canola | nucleus | 36.99 | 23.36 |
| CDY67518 | Canola | nucleus | 39.31 | 23.29 |
| CDY69244 | Canola | nucleus | 39.31 | 23.29 |
| CDX87836 | Canola | nucleus | 24.28 | 23.08 |
| CDY37299 | Canola | nucleus | 26.59 | 23.0 |
| CDY69021 | Canola | nucleus | 26.01 | 22.84 |
| CDY32420 | Canola | nucleus | 27.17 | 22.82 |
| CDY48879 | Canola | nucleus | 27.17 | 22.82 |
| CDY52953 | Canola | nucleus | 24.86 | 22.16 |
| CDY52832 | Canola | nucleus | 28.32 | 22.07 |
| CDY18628 | Canola | nucleus | 26.59 | 21.7 |
| CDY46544 | Canola | nucleus | 24.86 | 21.5 |
| CDY17783 | Canola | nucleus | 28.32 | 21.4 |
| CDX75689 | Canola | nucleus, plastid | 29.48 | 21.07 |
| CDY58082 | Canola | nucleus | 24.86 | 20.87 |
| CDY20892 | Canola | nucleus | 24.86 | 20.87 |
| CDX69349 | Canola | nucleus, plastid | 28.9 | 20.66 |
| CDY54696 | Canola | nucleus | 28.32 | 20.59 |
| CDY12790 | Canola | nucleus | 26.01 | 20.55 |
| CDX81350 | Canola | nucleus | 26.59 | 20.54 |
| CDY01450 | Canola | nucleus | 26.01 | 20.45 |
| CDX83127 | Canola | nucleus | 27.75 | 20.43 |
| CDY02086 | Canola | nucleus | 28.32 | 20.25 |
| CDY23010 | Canola | nucleus | 27.75 | 19.43 |
| CDY17009 | Canola | nucleus | 25.43 | 19.13 |
| CDY16193 | Canola | nucleus | 35.84 | 18.96 |
| CDY46443 | Canola | nucleus | 34.1 | 17.61 |
| CDY37010 | Canola | nucleus | 39.31 | 17.44 |
| CDY44994 | Canola | nucleus | 27.17 | 17.41 |
| CDY67869 | Canola | nucleus | 38.73 | 17.4 |
| CDY07344 | Canola | nucleus | 38.73 | 17.36 |
| CDY50735 | Canola | extracellular | 35.84 | 17.03 |
| CDY50734 | Canola | nucleus | 26.59 | 16.97 |
| CDY01768 | Canola | nucleus | 35.84 | 16.85 |
| CDX95919 | Canola | nucleus | 35.84 | 16.85 |
| CDX74440 | Canola | nucleus | 40.46 | 16.51 |
| CDX67434 | Canola | nucleus | 39.88 | 16.31 |
| CDY72477 | Canola | nucleus | 34.68 | 16.3 |
| CDY66672 | Canola | nucleus | 39.88 | 16.16 |
| CDY47405 | Canola | nucleus | 39.88 | 16.08 |
| CDY30261 | Canola | nucleus | 40.46 | 15.91 |
| TraesCS3D01G193100.1 | Wheat | nucleus | 41.04 | 14.92 |
| TraesCS3A01G189600.1 | Wheat | nucleus | 40.46 | 14.71 |
| Zm00001d040455_P001 | Maize | nucleus | 40.46 | 13.65 |
| Os01t0277500-01 | Rice | nucleus | 43.35 | 13.54 |
| EES00579 | Sorghum | nucleus | 39.88 | 13.48 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078EF94 | EnsemblPlants:CDX99791 | ProteinID:CDX99791 | ProteinID:CDX99791.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00108468001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF14 | UniParc:UPI0004EEAF87 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC05g22130D
Coordinates
chrLK031914:-:25306..26028
Molecular Weight (calculated)
19127.7 Da
IEP (calculated)
9.570
GRAVY (calculated)
-0.654
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQNSQGIK LFGKTITFNA NNLTNTIKKE EQQQQPEIQT KSAVGSPSSD LTAEKRPDKI IACPRCKSME TKFCYFNNYN VNQPRHFCKG CQRYWTAGGA
101: LRNVPVGAGR RKAKPPGRVG GFEELLGAAT ATVDQVELDA LLVEEWRAAA SHGGFRHDFP AKRLRCYTDG QSC
101: LRNVPVGAGR RKAKPPGRVG GFEELLGAAT ATVDQVELDA LLVEEWRAAA SHGGFRHDFP AKRLRCYTDG QSC
001: MATQDSQGIK LFGKTITFNA NITQTIKKEE QQQQQQPELQ ATTAVRSPSS DLTAEKRPDK IIPCPRCKSM ETKFCYFNNY NVNQPRHFCK GCQRYWTAGG
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
101: ALRNVPVGAG RRKSKPPGRV GGFAELLGAA TGAVDQVELD ALLVEEWRAA TASHGGFRHD FPVKRLRCYT DGQSC
Arabidopsis Description
DOF1.5Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.