Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43923 | Canola | nucleus | 85.71 | 96.89 |
| Bra030423.1-P | Field mustard | nucleus | 97.8 | 96.22 |
| CDY52953 | Canola | nucleus | 70.33 | 65.98 |
| CDY46544 | Canola | nucleus | 71.98 | 65.5 |
| CDY56923 | Canola | nucleus | 55.49 | 54.3 |
| CDY51457 | Canola | nucleus | 55.49 | 52.88 |
| CDY48879 | Canola | nucleus | 58.24 | 51.46 |
| CDY32420 | Canola | nucleus | 58.24 | 51.46 |
| CDY37299 | Canola | nucleus | 55.49 | 50.5 |
| CDY69021 | Canola | nucleus | 53.85 | 49.75 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 42.31 | 39.29 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 42.31 | 35.65 |
| GSMUA_Achr10P... | Banana | nucleus | 41.76 | 33.33 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 40.11 | 32.59 |
| CDY71347 | Canola | nucleus | 21.43 | 29.55 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 37.91 | 29.49 |
| CDY52832 | Canola | nucleus | 35.16 | 28.83 |
| CDY17783 | Canola | nucleus | 35.16 | 27.95 |
| CDY18628 | Canola | nucleus | 32.42 | 27.83 |
| CDY12790 | Canola | nucleus | 32.42 | 26.94 |
| CDY01450 | Canola | nucleus | 32.42 | 26.82 |
| CDY58082 | Canola | nucleus | 30.22 | 26.7 |
| CDY20892 | Canola | nucleus | 30.22 | 26.7 |
| CDY54696 | Canola | nucleus | 34.62 | 26.47 |
| CDX83127 | Canola | nucleus | 33.52 | 25.96 |
| CDX81350 | Canola | nucleus | 31.87 | 25.89 |
| CDY02086 | Canola | nucleus | 34.07 | 25.62 |
| CDY23010 | Canola | nucleus | 34.07 | 25.1 |
| CDX99791 | Canola | nucleus | 23.08 | 24.28 |
| CDY50789 | Canola | nucleus | 23.08 | 24.0 |
| CDY37670 | Canola | nucleus | 21.98 | 23.81 |
| CDX90171 | Canola | nucleus | 22.53 | 23.56 |
| CDY43321 | Canola | nucleus | 22.53 | 23.56 |
| CDY67393 | Canola | nucleus | 21.98 | 23.53 |
| CDY15647 | Canola | nucleus | 22.53 | 23.16 |
| CDX75689 | Canola | nucleus, plastid | 30.77 | 23.14 |
| CDY17009 | Canola | nucleus | 29.12 | 23.04 |
| CDX69349 | Canola | nucleus, plastid | 30.22 | 22.73 |
| CDY44994 | Canola | nucleus | 25.27 | 17.04 |
| CDY00286 | Canola | nucleus | 23.08 | 15.38 |
| CDY69084 | Canola | nucleus | 23.08 | 15.33 |
| CDY67518 | Canola | nucleus | 23.63 | 14.73 |
| CDY69244 | Canola | nucleus | 23.08 | 14.38 |
| CDY46443 | Canola | nucleus | 25.82 | 14.03 |
| CDY50734 | Canola | nucleus | 20.88 | 14.02 |
| CDY72477 | Canola | nucleus | 27.47 | 13.59 |
| CDX95919 | Canola | nucleus | 26.92 | 13.32 |
| CDY01768 | Canola | nucleus | 26.37 | 13.04 |
| CDY16193 | Canola | nucleus | 23.08 | 12.84 |
| CDY67869 | Canola | nucleus | 26.92 | 12.73 |
| CDY07344 | Canola | nucleus | 26.92 | 12.69 |
| CDY50735 | Canola | extracellular | 24.18 | 12.09 |
| CDY37010 | Canola | nucleus | 24.73 | 11.54 |
| CDY47405 | Canola | nucleus | 26.92 | 11.42 |
| CDY66672 | Canola | nucleus | 25.82 | 11.01 |
| CDX67434 | Canola | nucleus | 25.27 | 10.87 |
| CDX74440 | Canola | nucleus | 25.27 | 10.85 |
| CDY30261 | Canola | nucleus | 25.27 | 10.45 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078DEZ6 | EnsemblPlants:CDX87836 | ProteinID:CDX87836 | ProteinID:CDX87836.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00147000001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI0004EE082D |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC06g08980D
Coordinates
chrLK031852:+:502878..503426
Molecular Weight (calculated)
20708.4 Da
IEP (calculated)
9.107
GRAVY (calculated)
-1.071
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDLTSAYYH HQSMLMMAAK QQQPELPEQQ QLKCPRCDSP NTKFCYYNNY NLSQPRHYCK NCRRYWTKGG SLRNIPVGGG SRKNTKRSYS SSPSSSNLKD
101: KTVAVPDQKP NSEEESRPKP VEEERRMTGQ EMDPTRMLYG LPVGDPRFTS LLGADVGIRY ETGSNWYPGI HLGLGPGIPR DD
101: KTVAVPDQKP NSEEESRPKP VEEERRMTGQ EMDPTRMLYG LPVGDPRFTS LLGADVGIRY ETGSNWYPGI HLGLGPGIPR DD
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.