Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20892 | Canola | nucleus | 71.74 | 80.1 |
| Bra015609.1-P | Field mustard | nucleus | 77.39 | 79.82 |
| CDY58082 | Canola | nucleus | 70.87 | 79.13 |
| AT1G47655.1 | Thale cress | nucleus | 66.52 | 73.21 |
| VIT_18s0001g11310.t01 | Wine grape | nucleus | 40.0 | 40.71 |
| CDY18628 | Canola | nucleus | 32.17 | 34.91 |
| CDY52832 | Canola | nucleus | 33.48 | 34.68 |
| CDY56923 | Canola | nucleus | 27.83 | 34.41 |
| CDY51457 | Canola | nucleus | 27.83 | 33.51 |
| CDY37299 | Canola | nucleus | 29.13 | 33.5 |
| CDX81350 | Canola | nucleus | 32.61 | 33.48 |
| CDX83127 | Canola | nucleus | 33.91 | 33.19 |
| CDY12790 | Canola | nucleus | 31.3 | 32.88 |
| CDY54696 | Canola | nucleus | 33.91 | 32.77 |
| CDY17783 | Canola | nucleus | 32.61 | 32.75 |
| CDY01450 | Canola | nucleus | 31.3 | 32.73 |
| CDY71347 | Canola | nucleus | 18.7 | 32.58 |
| CDY69021 | Canola | nucleus | 27.39 | 31.98 |
| CDY02086 | Canola | nucleus | 33.48 | 31.82 |
| Solyc04g079570.1.1 | Tomato | nucleus | 33.04 | 31.8 |
| CDY52953 | Canola | nucleus | 26.52 | 31.44 |
| CDY23010 | Canola | nucleus | 33.48 | 31.17 |
| PGSC0003DMT400030496 | Potato | nucleus | 26.52 | 31.12 |
| CDY32420 | Canola | nucleus | 27.39 | 30.58 |
| CDY48879 | Canola | nucleus | 27.39 | 30.58 |
| CDY43923 | Canola | nucleus | 20.87 | 29.81 |
| CDY46544 | Canola | nucleus | 25.65 | 29.5 |
| CDX87836 | Canola | nucleus | 23.04 | 29.12 |
| KXG31638 | Sorghum | nucleus | 29.57 | 28.94 |
| Zm00001d039482_P001 | Maize | nucleus | 28.26 | 28.14 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 27.83 | 27.83 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 27.83 | 27.83 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 27.83 | 26.89 |
| CDX99791 | Canola | nucleus | 19.13 | 25.43 |
| CDY50789 | Canola | nucleus | 19.13 | 25.14 |
| CDY15647 | Canola | nucleus | 19.13 | 24.86 |
| CDY43321 | Canola | nucleus | 17.83 | 23.56 |
| CDX90171 | Canola | nucleus | 17.83 | 23.56 |
| CDX75689 | Canola | nucleus, plastid | 24.78 | 23.55 |
| CDX69349 | Canola | nucleus, plastid | 24.78 | 23.55 |
| CDY37670 | Canola | nucleus | 16.96 | 23.21 |
| CDY67393 | Canola | nucleus | 16.96 | 22.94 |
| CDY69084 | Canola | nucleus | 21.3 | 17.88 |
| CDY00286 | Canola | nucleus | 20.87 | 17.58 |
| CDY69244 | Canola | nucleus | 22.17 | 17.47 |
| CDY67518 | Canola | nucleus | 21.3 | 16.78 |
| CDY50734 | Canola | nucleus | 18.7 | 15.87 |
| CDY44994 | Canola | nucleus | 18.26 | 15.56 |
| CDY16193 | Canola | nucleus | 19.57 | 13.76 |
| CDY46443 | Canola | nucleus | 20.0 | 13.73 |
| CDX95919 | Canola | nucleus | 21.74 | 13.59 |
| CDY37010 | Canola | nucleus | 22.61 | 13.33 |
| CDY01768 | Canola | nucleus | 21.3 | 13.32 |
| CDY72477 | Canola | nucleus | 20.87 | 13.04 |
| CDY67869 | Canola | nucleus | 21.74 | 12.99 |
| CDY07344 | Canola | nucleus | 21.74 | 12.95 |
| CDY50735 | Canola | extracellular | 20.0 | 12.64 |
| CDY47405 | Canola | nucleus | 23.48 | 12.59 |
| CDX74440 | Canola | nucleus | 23.04 | 12.5 |
| CDY66672 | Canola | nucleus | 23.04 | 12.41 |
| CDX67434 | Canola | nucleus | 22.61 | 12.29 |
| CDY30261 | Canola | nucleus | 23.04 | 12.05 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078FVB9 | UniProt:A0A078FVB9 | EnsemblPlants:CDY17009 | ProteinID:CDY17009 | ProteinID:CDY17009.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00094960001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF77 | UniParc:UPI0004EDB353 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaA08g03730DBnaA08g03730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVB9]
Coordinates
chrLK032069:-:137191..139663
Molecular Weight (calculated)
24849.2 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.303
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSESNQTRP ARVQGSTAAY PPPNMAEPLP CPRCNSIITK FCYYNNYNLL QPRYFCKSCR RYWTQGGTLR DVPVGGGTRR SSSKRNRSFS SNATTASSSS
101: SSSCSASVIT MSQGTVTNEA KGSNLNSGHG SFASLLSEQS DGAAFLALGS GTGGLDYEFG YGYGLEDMSI GSIPVVGGGD TWQIKEIGGK SGDSLIWPGF
201: NSKQQCLLIP LLFCLFLFRF FCLFSYPREE
101: SSSCSASVIT MSQGTVTNEA KGSNLNSGHG SFASLLSEQS DGAAFLALGS GTGGLDYEFG YGYGLEDMSI GSIPVVGGGD TWQIKEIGGK SGDSLIWPGF
201: NSKQQCLLIP LLFCLFLFRF FCLFSYPREE
001: MPSEPNQTRP TRVQPSTAAY PPPNLAEPLP CPRCNSTTTK FCYYNNYNLA QPRYYCKSCR RYWTQGGTLR DVPVGGGTRR SSSKRHRSFS TTATSSSSSS
101: SVITTTTQEP ATTEASQTKV TNLISGHGSF ASLLGLGSGN GGLDYGFGYG YGLEEMSIGY LGDSSVGEIP VVDGCGGDTW QIGEIEGKSG GDSLIWPGLE
201: ISMQTNDVK
101: SVITTTTQEP ATTEASQTKV TNLISGHGSF ASLLGLGSGN GGLDYGFGYG YGLEEMSIGY LGDSSVGEIP VVDGCGGDTW QIGEIEGKSG GDSLIWPGLE
201: ISMQTNDVK
Arabidopsis Description
DOF1.6Dof zinc finger protein DOF1.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.