Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46443 | Canola | nucleus | 82.96 | 66.87 |
| CDY50734 | Canola | nucleus | 53.7 | 53.51 |
| CDY16193 | Canola | nucleus | 64.44 | 53.21 |
| CDY50735 | Canola | extracellular | 67.78 | 50.27 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 66.67 | 48.39 |
| CDY01768 | Canola | nucleus | 50.37 | 36.96 |
| CDX95919 | Canola | nucleus | 50.0 | 36.68 |
| CDY67869 | Canola | nucleus | 51.85 | 36.36 |
| CDY07344 | Canola | nucleus | 51.85 | 36.27 |
| CDY72477 | Canola | nucleus | 49.26 | 36.14 |
| CDY71347 | Canola | nucleus | 17.04 | 34.85 |
| CDY43923 | Canola | nucleus | 17.41 | 29.19 |
| CDY67393 | Canola | nucleus | 18.15 | 28.82 |
| CDY43321 | Canola | nucleus | 18.52 | 28.74 |
| CDX90171 | Canola | nucleus | 18.52 | 28.74 |
| CDY37670 | Canola | nucleus | 17.78 | 28.57 |
| CDX99791 | Canola | nucleus | 17.41 | 27.17 |
| CDY69084 | Canola | nucleus | 27.41 | 27.01 |
| CDY50789 | Canola | nucleus | 17.41 | 26.86 |
| CDY00286 | Canola | nucleus | 27.04 | 26.74 |
| CDY67518 | Canola | nucleus | 28.52 | 26.37 |
| CDY69244 | Canola | nucleus | 28.52 | 26.37 |
| CDY15647 | Canola | nucleus | 17.04 | 25.99 |
| CDX87836 | Canola | nucleus | 17.04 | 25.27 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 30.0 | 24.7 |
| CDY52953 | Canola | nucleus | 17.41 | 24.23 |
| CDY46544 | Canola | nucleus | 17.41 | 23.5 |
| CDY69021 | Canola | nucleus | 17.04 | 23.35 |
| CDY56923 | Canola | nucleus | 15.93 | 23.12 |
| CDY52832 | Canola | nucleus | 18.89 | 22.97 |
| CDY32420 | Canola | nucleus | 17.41 | 22.82 |
| CDY48879 | Canola | nucleus | 17.41 | 22.82 |
| CDY51457 | Canola | nucleus | 15.93 | 22.51 |
| CDY37299 | Canola | nucleus | 16.67 | 22.5 |
| CDY12790 | Canola | nucleus | 18.15 | 22.37 |
| CDY17783 | Canola | nucleus | 18.89 | 22.27 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 24.81 | 22.19 |
| CDY18628 | Canola | nucleus | 17.41 | 22.17 |
| CDX83127 | Canola | nucleus | 19.26 | 22.13 |
| CDY54696 | Canola | nucleus | 19.26 | 21.85 |
| CDY01450 | Canola | nucleus | 17.41 | 21.36 |
| CDY20892 | Canola | nucleus | 16.3 | 21.36 |
| CDY58082 | Canola | nucleus | 16.3 | 21.36 |
| CDY02086 | Canola | nucleus | 18.89 | 21.07 |
| CDY23010 | Canola | nucleus | 19.26 | 21.05 |
| CDX81350 | Canola | nucleus | 17.41 | 20.98 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 30.0 | 20.82 |
| KRH70746 | Soybean | nucleus, plastid | 36.67 | 20.41 |
| CDY66672 | Canola | nucleus | 31.85 | 20.14 |
| KRH74885 | Soybean | nucleus | 35.56 | 20.04 |
| CDY47405 | Canola | nucleus | 31.48 | 19.81 |
| GSMUA_Achr11P... | Banana | nucleus | 30.0 | 19.24 |
| KRH50577 | Soybean | nucleus | 33.33 | 18.79 |
| CDX74440 | Canola | nucleus | 29.26 | 18.63 |
| CDY17009 | Canola | nucleus | 15.56 | 18.26 |
| KRG89621 | Soybean | nucleus | 32.59 | 18.26 |
| CDY37010 | Canola | nucleus | 26.3 | 18.21 |
| CDX75689 | Canola | nucleus, plastid | 16.3 | 18.18 |
| CDX69349 | Canola | nucleus, plastid | 15.93 | 17.77 |
| CDY30261 | Canola | nucleus | 28.89 | 17.73 |
| CDX67434 | Canola | nucleus | 27.41 | 17.49 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 29.63 | 17.2 |
| Os01t0264000-01 | Rice | nucleus | 30.37 | 16.53 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 31.11 | 15.58 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 30.74 | 15.4 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 30.37 | 15.24 |
| EES02731 | Sorghum | nucleus | 29.63 | 14.29 |
| Zm00001d040362_P001 | Maize | nucleus | 29.63 | 13.99 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078I6F1 | UniProt:A0A078I6F1 | EnsemblPlants:CDY44994 | ProteinID:CDY44994 | ProteinID:CDY44994.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00081189001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF14 | UniParc:UPI0004EBDCBF | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng12240DBnaCnng12240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6F1]
Coordinates
chrLK032608:-:147212..148353
Molecular Weight (calculated)
30696.1 Da
IEP (calculated)
7.788
GRAVY (calculated)
-0.990
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYSSSSSFP SLGLYMMNNQ SATDNSEQDD TTLQMSSDLN KESKETSENN YDKHSEITTT TTTSEEKTTE LKKPDKILPC PRCNSADTKF CYYNNYNVSQ
101: PRHFCRNCQR YWTSGGSMRT VPVGSGRRKN KGWVSTDLID INSKNNSNDY NSSSTKILSF ESSDSWVSEK GQHRSSDSKM TADSVSQDFN KFQGFLPAQV
201: TSSVSPPWPY HQYPLNPSFY HIPVCWGYTV PVSSTLETST CLGKRTRGEA SHENVREQRH FRESKVKFTL
101: PRHFCRNCQR YWTSGGSMRT VPVGSGRRKN KGWVSTDLID INSKNNSNDY NSSSTKILSF ESSDSWVSEK GQHRSSDSKM TADSVSQDFN KFQGFLPAQV
201: TSSVSPPWPY HQYPLNPSFY HIPVCWGYTV PVSSTLETST CLGKRTRGEA SHENVREQRH FRESKVKFTL
001: MSSKIGMSQV RDTPVKLFGW TITPVSHDPY SSSSHVLPDS SSSSSSSSLS LRPHMMNNQS VTDNTSLKLS SNLNNESKET SENSDDQHSE ITTITSEEEK
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G26790]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.