Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P05020_001 | Banana | nucleus | 57.01 | 73.17 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 43.47 | 60.6 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 47.27 | 51.16 |
| GSMUA_Achr11P... | Banana | nucleus | 28.5 | 49.59 |
| GSMUA_Achr2P09110_001 | Banana | nucleus | 12.35 | 43.7 |
| GSMUA_Achr6P10720_001 | Banana | nucleus | 27.79 | 42.86 |
| GSMUA_Achr4P15140_001 | Banana | nucleus | 14.73 | 41.61 |
| GSMUA_Achr4P08020_001 | Banana | nucleus | 14.25 | 39.74 |
| GSMUA_Achr10P... | Banana | nucleus | 33.25 | 39.22 |
| GSMUA_Achr9P06430_001 | Banana | nucleus | 14.01 | 38.31 |
| GSMUA_Achr11P... | Banana | nucleus | 42.28 | 38.2 |
| GSMUA_Achr2P22000_001 | Banana | nucleus | 33.97 | 37.83 |
| GSMUA_Achr3P01850_001 | Banana | nucleus | 30.64 | 37.28 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 37.53 | 33.98 |
| Bra024683.1-P | Field mustard | nucleus | 26.13 | 33.64 |
| CDY16193 | Canola | nucleus | 26.13 | 33.64 |
| CDX95919 | Canola | nucleus | 28.74 | 32.88 |
| CDY01768 | Canola | nucleus | 28.27 | 32.34 |
| Bra004396.1-P | Field mustard | nucleus | 28.27 | 32.34 |
| CDY72477 | Canola | nucleus | 28.27 | 32.34 |
| AT1G69570.1 | Thale cress | nucleus | 30.17 | 31.83 |
| KRH70746 | Soybean | nucleus, plastid | 36.34 | 31.55 |
| CDY67869 | Canola | nucleus | 28.74 | 31.43 |
| KRH74885 | Soybean | nucleus | 35.63 | 31.32 |
| KRH50577 | Soybean | nucleus | 35.39 | 31.11 |
| CDY07344 | Canola | nucleus | 28.5 | 31.09 |
| Bra003994.1-P | Field mustard | nucleus | 28.5 | 31.09 |
| CDY44994 | Canola | nucleus | 19.24 | 30.0 |
| KRG89621 | Soybean | nucleus | 34.2 | 29.88 |
| CDY50735 | Canola | extracellular | 25.65 | 29.67 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 13.78 | 29.59 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 25.42 | 28.76 |
| Bra016286.1-P | Field mustard | nucleus | 22.57 | 28.36 |
| CDY46443 | Canola | nucleus | 22.33 | 28.06 |
| CDY50734 | Canola | nucleus | 17.58 | 27.31 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 14.73 | 26.5 |
| GSMUA_Achr2P13350_001 | Banana | nucleus | 14.49 | 26.29 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 13.78 | 25.89 |
| GSMUA_Achr10P... | Banana | nucleus | 14.01 | 25.88 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 11.16 | 19.67 |
Protein Annotations
| MapMan:15.5.1.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G25090_001 | EnsemblPlants:GSMUA_Achr11P25090_001 |
| EnsemblPlants:GSMUA_Achr11T25090_001 | InterPro:IPR003851 | UniProt:M0RV89 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF15 | UniParc:UPI000296733F | InterPro:Znf_Dof | SEG:seg |
Description
Putative Dof zinc finger protein DOF3.3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25090_001]
Coordinates
chr11:+:24332306..24335038
Molecular Weight (calculated)
46083.9 Da
IEP (calculated)
7.430
GRAVY (calculated)
-0.617
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEPGDPAIK LFGTTIPMAA AADEEPDVEE AEAETQQVRR EAHLSSFLDP CSSGNEDDHK TSVEAEKEAA KAKTEHAKSE ADGSVPEKVL KKPDKILPCP
101: RCNSMETKFC YYNNYNFNQP RHFCKNCQRY WTAGGTMRYV PVGAGRRKSK HSNSPYRNVV ILSDGFQSFQ KGTILKSDQE DPLYESVTCA FNIREQGNNA
201: ASDSMICGYK REEPSCSSSA TASNFVKNVS AEKAVHVRSS GMRVYCNGLA PLPHLQYYPG VPWAHPWSLA WNILMAASPF CASTLPFSFM PAPFLGYSIL
301: PNGTWNVPCA GSNGCKSPSP STSDSGCSGN GSPTLGKHSR DSSIQGENNT KKPLWVPKTL RMDDPEEASK SSIWATLGIK PEMGSIFQFK SEHKAKKLDG
401: AQLLHENPAA VSRSHCFQES T
101: RCNSMETKFC YYNNYNFNQP RHFCKNCQRY WTAGGTMRYV PVGAGRRKSK HSNSPYRNVV ILSDGFQSFQ KGTILKSDQE DPLYESVTCA FNIREQGNNA
201: ASDSMICGYK REEPSCSSSA TASNFVKNVS AEKAVHVRSS GMRVYCNGLA PLPHLQYYPG VPWAHPWSLA WNILMAASPF CASTLPFSFM PAPFLGYSIL
301: PNGTWNVPCA GSNGCKSPSP STSDSGCSGN GSPTLGKHSR DSSIQGENNT KKPLWVPKTL RMDDPEEASK SSIWATLGIK PEMGSIFQFK SEHKAKKLDG
401: AQLLHENPAA VSRSHCFQES T
001: MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
101: KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA
201: QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301: PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN
401: EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
Arabidopsis Description
CDF3Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.