Factsheet for GSMUA_Achr2P13350_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P09110_001	Banana	nucleus	17.67	34.45
GSMUA_Achr7P09590_001	Banana	nucleus	28.88	34.18
GSMUA_Achr4P15140_001	Banana	nucleus	19.83	30.87
GSMUA_Achr2P15700_001	Banana	nucleus	29.31	30.36
GSMUA_Achr4P30860_001	Banana	nucleus	29.74	29.49
GSMUA_Achr10P...	Banana	nucleus	28.88	29.39
GSMUA_Achr4P08020_001	Banana	nucleus	18.97	29.14
GSMUA_Achr9P06430_001	Banana	nucleus	18.1	27.27
GSMUA_Achr6P29500_001	Banana	nucleus	25.0	24.27
EES17301	Sorghum	nucleus	25.43	21.45
HORVU4Hr1G013890.1	Barley	nucleus	24.14	20.97
TraesCS4D01G080100.1	Wheat	nucleus	23.71	20.91
Zm00001d024790_P001	Maize	nucleus	21.98	20.82
TraesCS4B01G081500.1	Wheat	nucleus	23.71	20.75
TraesCS4A01G234000.1	Wheat	nucleus	23.71	20.68
GSMUA_Achr6P10720_001	Banana	nucleus	23.71	20.15
GSMUA_Achr11P...	Banana	nucleus	20.26	19.42
Zm00001d033325_P001	Maize	nucleus, plastid	25.43	18.79
Zm00001d013724_P001	Maize	nucleus	26.29	18.21
GSMUA_Achr9P05020_001	Banana	nucleus	25.43	17.99
GSMUA_Achr5P07660_001	Banana	nucleus	23.28	17.88
EER91220	Sorghum	plastid	25.86	17.09
GSMUA_Achr3P01850_001	Banana	nucleus	24.14	16.18
GSMUA_Achr2P22000_001	Banana	nucleus	26.29	16.14
GSMUA_Achr6P32240_001	Banana	nucleus	26.72	15.94
GSMUA_Achr11P...	Banana	nucleus	26.29	14.49
GSMUA_Achr10P...	Banana	nucleus	21.98	14.29
GSMUA_Achr11P...	Banana	nucleus	26.29	13.09
GSMUA_Achr2P11520_001	Banana	nucleus	24.14	12.04

Protein Annotations

MapMan:15.5.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G13350_001	EnsemblPlants:GSMUA_Achr2P13350_001	EnsemblPlants:GSMUA_Achr2T13350_001
InterPro:IPR003851	UniProt:M0S7M6	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF81	UniParc:UPI000294F89B	InterPro:Znf_Dof	SEG:seg	:

Description

Putative Dof zinc finger protein DOF5.8 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13350_001]

Coordinates

chr2:+:15527004..15527702

Molecular Weight (calculated)

23845.3 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.262

Length

232 amino acids

Sequence
(BLAST)

001: MPVESGEGRR RPAEGELPAV AATAKERCPR CESRDTKFCY YNNYNMSQPR HFCKSCRRYW TLGGSLRNVP IGGASRKRLR PSPSPSTASA LRPGLALPAL
101: SAPPPPSAPE LVAAPDGPPP PSHGSLIPGG PVQAGLLGLD EPFLPGRAGF GLGLGLGLGC SARAAEEMGF GLGSTLLWPH SLLDEPGDAW RVGAGVGGGD
201: CFAAPGPATS AWTDLAISAP ADGGAAPARE FR

Best Arabidopsis Sequence Match ( AT5G66940.1 )
(BLAST)

001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA

Arabidopsis Description

DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.