Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P09590_001 | Banana | nucleus | 66.96 | 76.53 |
| GSMUA_Achr10P... | Banana | nucleus | 73.66 | 72.37 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 65.62 | 62.82 |
| KRH47156 | Soybean | nucleus | 43.3 | 45.97 |
| KRH09992 | Soybean | nucleus | 43.3 | 45.97 |
| Solyc03g121400.1.1 | Tomato | nucleus | 42.86 | 45.71 |
| PGSC0003DMT400006421 | Potato | nucleus | 42.41 | 45.67 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 43.75 | 45.37 |
| Solyc06g062520.1.1 | Tomato | nucleus | 38.84 | 45.31 |
| CDY56923 | Canola | nucleus | 37.05 | 44.62 |
| KRH23341 | Soybean | nucleus | 41.96 | 44.34 |
| Bra031269.1-P | Field mustard | nucleus | 37.5 | 43.98 |
| KRH44186 | Soybean | nucleus | 41.52 | 43.66 |
| Bra023888.1-P | Field mustard | nucleus | 38.84 | 43.5 |
| CDY51457 | Canola | nucleus | 37.05 | 43.46 |
| CDY69021 | Canola | nucleus | 37.95 | 43.15 |
| CDY37299 | Canola | nucleus | 38.39 | 43.0 |
| Bra001822.1-P | Field mustard | nucleus | 39.29 | 42.93 |
| CDY32420 | Canola | nucleus | 39.29 | 42.72 |
| CDY48879 | Canola | nucleus | 39.29 | 42.72 |
| AT1G51700.1 | Thale cress | nucleus | 36.61 | 42.27 |
| AT3G21270.1 | Thale cress | nucleus | 38.39 | 42.16 |
| CDY43923 | Canola | nucleus | 29.91 | 41.61 |
| CDY52953 | Canola | nucleus | 35.27 | 40.72 |
| CDX87836 | Canola | nucleus | 32.59 | 40.11 |
| CDY46544 | Canola | nucleus | 35.27 | 39.5 |
| Bra030423.1-P | Field mustard | nucleus | 32.59 | 39.46 |
| Bra014297.1-P | Field mustard | nucleus | 34.82 | 39.0 |
| GSMUA_Achr2P09110_001 | Banana | nucleus | 17.86 | 33.61 |
| GSMUA_Achr4P15140_001 | Banana | nucleus | 20.09 | 30.2 |
| GSMUA_Achr2P13350_001 | Banana | nucleus | 30.36 | 29.31 |
| GSMUA_Achr4P08020_001 | Banana | nucleus | 18.75 | 27.81 |
| GSMUA_Achr9P06430_001 | Banana | nucleus | 17.86 | 25.97 |
| CDX75689 | Canola | nucleus, plastid | 26.79 | 24.79 |
| CDX69349 | Canola | nucleus, plastid | 26.79 | 24.79 |
| Bra011800.1-P | Field mustard | nucleus, plastid | 26.79 | 24.79 |
| GSMUA_Achr6P29500_001 | Banana | nucleus | 24.55 | 23.01 |
| AT4G38000.1 | Thale cress | nucleus, plastid | 24.55 | 22.36 |
| GSMUA_Achr11P... | Banana | nucleus | 23.21 | 21.49 |
| GSMUA_Achr6P10720_001 | Banana | nucleus | 23.66 | 19.41 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 24.55 | 18.21 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 25.89 | 17.68 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 26.79 | 15.42 |
| GSMUA_Achr2P22000_001 | Banana | nucleus | 25.89 | 15.34 |
| GSMUA_Achr3P01850_001 | Banana | nucleus | 23.66 | 15.32 |
| GSMUA_Achr10P... | Banana | nucleus | 24.11 | 15.13 |
| GSMUA_Achr11P... | Banana | nucleus | 25.89 | 13.78 |
| GSMUA_Achr11P... | Banana | nucleus | 25.0 | 12.02 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 21.43 | 10.32 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G15700_001 | EnsemblPlants:GSMUA_Achr2P15700_001 | EnsemblPlants:GSMUA_Achr2T15700_001 |
| InterPro:IPR003851 | UniProt:M0S8B1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI0002949C66 | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Dof zinc finger protein DOF1.7 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15700_001]
Coordinates
chr2:+:16888165..16888839
Molecular Weight (calculated)
24222.3 Da
IEP (calculated)
8.008
GRAVY (calculated)
-0.554
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDSTASAAF QAAMTRFPEP EQNLRCPRCD STDTKFCYYN NHNISQPRHF CKSCRRYWTK GGMLRNIPVG GGTRKNSKRS GSSSSSSSAA YSCKRPNPSR
101: PPSHLADLPK TEPVSVLYPP LDPDRHLLDM TGSFSSLLAS DGHLETILES FHPVCGGDVT VLPNSASAIR SGIHIQGMEL QGSVSNSNTP AAAVENSERL
201: EGAPGCWAAS WTDLAIYNPG SNMQ
101: PPSHLADLPK TEPVSVLYPP LDPDRHLLDM TGSFSSLLAS DGHLETILES FHPVCGGDVT VLPNSASAIR SGIHIQGMEL QGSVSNSNTP AAAVENSERL
201: EGAPGCWAAS WTDLAIYNPG SNMQ
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.