Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023888.1-P | Field mustard | nucleus | 99.5 | 99.5 |
| CDY69021 | Canola | nucleus | 92.0 | 93.4 |
| CDY56923 | Canola | nucleus | 80.5 | 86.56 |
| CDY32420 | Canola | nucleus | 89.0 | 86.41 |
| CDY51457 | Canola | nucleus | 82.0 | 85.86 |
| CDY48879 | Canola | nucleus | 87.5 | 84.95 |
| AT3G21270.1 | Thale cress | nucleus | 80.5 | 78.92 |
| CDY46544 | Canola | nucleus | 58.5 | 58.5 |
| CDY52953 | Canola | nucleus | 56.0 | 57.73 |
| CDY43923 | Canola | nucleus | 46.0 | 57.14 |
| CDX87836 | Canola | nucleus | 50.5 | 55.49 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 46.5 | 47.45 |
| KRH47156 | Soybean | nucleus | 48.5 | 45.97 |
| KRH09992 | Soybean | nucleus | 47.5 | 45.02 |
| KRH23341 | Soybean | nucleus | 47.5 | 44.81 |
| KRH44186 | Soybean | nucleus | 46.5 | 43.66 |
| VIT_09s0002g02490.t01 | Wine grape | nucleus | 44.5 | 41.2 |
| GSMUA_Achr10P... | Banana | nucleus | 46.0 | 40.35 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 43.0 | 38.39 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 40.5 | 34.62 |
| CDY71347 | Canola | nucleus | 22.5 | 34.09 |
| CDY20892 | Canola | nucleus | 34.0 | 33.01 |
| CDY58082 | Canola | nucleus | 33.5 | 32.52 |
| CDY52832 | Canola | nucleus | 33.0 | 29.73 |
| CDY17009 | Canola | nucleus | 33.5 | 29.13 |
| CDY17783 | Canola | nucleus | 32.5 | 28.38 |
| CDY54696 | Canola | nucleus | 33.5 | 28.15 |
| CDY02086 | Canola | nucleus | 34.0 | 28.1 |
| CDX83127 | Canola | nucleus | 33.0 | 28.09 |
| CDY18628 | Canola | nucleus | 29.5 | 27.83 |
| CDY23010 | Canola | nucleus | 34.0 | 27.53 |
| CDY37670 | Canola | nucleus | 22.5 | 26.79 |
| CDX81350 | Canola | nucleus | 30.0 | 26.79 |
| CDX99791 | Canola | nucleus | 23.0 | 26.59 |
| CDY15647 | Canola | nucleus | 23.5 | 26.55 |
| CDY12790 | Canola | nucleus | 29.0 | 26.48 |
| CDY67393 | Canola | nucleus | 22.5 | 26.47 |
| CDY01450 | Canola | nucleus | 29.0 | 26.36 |
| CDY50789 | Canola | nucleus | 23.0 | 26.29 |
| CDY43321 | Canola | nucleus | 22.5 | 25.86 |
| CDX90171 | Canola | nucleus | 22.5 | 25.86 |
| CDX69349 | Canola | nucleus, plastid | 29.0 | 23.97 |
| CDX75689 | Canola | nucleus, plastid | 29.0 | 23.97 |
| CDY00286 | Canola | nucleus | 25.0 | 18.32 |
| CDY69084 | Canola | nucleus | 25.0 | 18.25 |
| CDY69244 | Canola | nucleus | 25.0 | 17.12 |
| CDY67518 | Canola | nucleus | 25.0 | 17.12 |
| CDY44994 | Canola | nucleus | 22.5 | 16.67 |
| CDY50734 | Canola | nucleus | 21.0 | 15.5 |
| CDY16193 | Canola | nucleus | 24.5 | 14.98 |
| CDX95919 | Canola | nucleus | 26.5 | 14.4 |
| CDY72477 | Canola | nucleus | 26.5 | 14.4 |
| CDY46443 | Canola | nucleus | 24.0 | 14.33 |
| CDY01768 | Canola | nucleus | 26.0 | 14.13 |
| CDY37010 | Canola | nucleus | 27.5 | 14.1 |
| CDY50735 | Canola | extracellular | 25.5 | 14.01 |
| CDY07344 | Canola | nucleus | 26.0 | 13.47 |
| CDY67869 | Canola | nucleus | 25.5 | 13.25 |
| CDX67434 | Canola | nucleus | 27.0 | 12.77 |
| CDX74440 | Canola | nucleus | 27.0 | 12.74 |
| CDY30261 | Canola | nucleus | 27.0 | 12.27 |
| CDY47405 | Canola | nucleus | 26.0 | 12.12 |
| CDY66672 | Canola | nucleus | 25.5 | 11.94 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HIY3 | UniProt:A0A078HIY3 | EnsemblPlants:CDY37299 | ProteinID:CDY37299 | ProteinID:CDY37299.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00063821001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF23 | UniParc:UPI0004EECCA1 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g25190DBnaA01g25190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIY3]
Coordinates
chrLK032397:-:189092..189694
Molecular Weight (calculated)
21519.2 Da
IEP (calculated)
9.777
GRAVY (calculated)
-0.973
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDPAAYYQS MMAKQQQQQP QFPVQEQLNC PRCDSPNTKF CYYNNYNLSQ PRHFCKSCRR YWTKGGALRN VPVGGGTRKN AKRSTSSPTS PSNNKKTKNT
101: DPDPNSQTGN KPDTDPTRML YGFPIGDQDV KGMEMGGGGG SFSSLLASNM QLGLGGIILD GSGWDPGMGL RRSEAGNGGG GGGGGGNPWT NLALNRVEKN
101: DPDPNSQTGN KPDTDPTRML YGFPIGDQDV KGMEMGGGGG SFSSLLASNM QLGLGGIILD GSGWDPGMGL RRSEAGNGGG GGGGGGNPWT NLALNRVEKN
001: MQDPAAYYQT MMAKQQQQQQ PQFAEQEQLK CPRCDSPNTK FCYYNNYNLS QPRHFCKSCR RYWTKGGALR NVPVGGGSRK NATKRSTSSS SSASSPSNSS
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
101: QNKKTKNPDP DPDPRNSQKP DLDPTRMLYG FPIGDQDVKG MEIGGSFSSL LANNMQLGLG GGGIMLDGSG WDHPGMGLGL RRTEPGNNNN NPWTDLAMNR
201: AEKN
Arabidopsis Description
DOF3.1DOF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VA07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.