Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44994 | Canola | nucleus | 53.51 | 53.7 |
| CDY16193 | Canola | nucleus | 61.25 | 50.76 |
| CDY50735 | Canola | extracellular | 65.31 | 48.63 |
| CDY46443 | Canola | nucleus | 53.87 | 43.58 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 52.77 | 38.44 |
| CDY07344 | Canola | nucleus | 48.34 | 33.94 |
| CDY67869 | Canola | nucleus | 46.86 | 32.99 |
| CDY71347 | Canola | nucleus | 15.87 | 32.58 |
| CDY72477 | Canola | nucleus | 42.07 | 30.98 |
| CDX95919 | Canola | nucleus | 42.07 | 30.98 |
| CDY01768 | Canola | nucleus | 41.7 | 30.71 |
| CDY43321 | Canola | nucleus | 18.08 | 28.16 |
| CDX90171 | Canola | nucleus | 18.08 | 28.16 |
| CDX99791 | Canola | nucleus | 16.97 | 26.59 |
| CDY15647 | Canola | nucleus | 17.34 | 26.55 |
| CDY50789 | Canola | nucleus | 16.97 | 26.29 |
| CDY69244 | Canola | nucleus | 28.04 | 26.03 |
| CDY67393 | Canola | nucleus | 16.24 | 25.88 |
| CDY67518 | Canola | nucleus | 27.68 | 25.68 |
| CDY37670 | Canola | nucleus | 15.87 | 25.6 |
| CDY69084 | Canola | nucleus | 25.83 | 25.55 |
| CDY00286 | Canola | nucleus | 25.46 | 25.27 |
| CDY43923 | Canola | nucleus | 14.39 | 24.22 |
| CDY56923 | Canola | nucleus | 14.76 | 21.51 |
| CDY37299 | Canola | nucleus | 15.5 | 21.0 |
| CDY51457 | Canola | nucleus | 14.76 | 20.94 |
| CDX87836 | Canola | nucleus | 14.02 | 20.88 |
| CDY20892 | Canola | nucleus | 15.87 | 20.87 |
| CDY58082 | Canola | nucleus | 15.87 | 20.87 |
| CDY69021 | Canola | nucleus | 15.13 | 20.81 |
| CDY52953 | Canola | nucleus | 14.76 | 20.62 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 24.72 | 20.43 |
| CDY52832 | Canola | nucleus | 16.61 | 20.27 |
| CDY46544 | Canola | nucleus | 14.76 | 20.0 |
| CDY48879 | Canola | nucleus | 15.13 | 19.9 |
| CDY32420 | Canola | nucleus | 15.13 | 19.9 |
| CDY18628 | Canola | nucleus | 15.5 | 19.81 |
| CDY17783 | Canola | nucleus | 16.61 | 19.65 |
| CDY37010 | Canola | nucleus | 28.04 | 19.49 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 21.4 | 19.21 |
| CDY66672 | Canola | nucleus | 30.26 | 19.2 |
| CDY47405 | Canola | nucleus | 30.26 | 19.11 |
| CDX81350 | Canola | nucleus | 15.5 | 18.75 |
| CDX83127 | Canola | nucleus | 16.24 | 18.72 |
| CDY12790 | Canola | nucleus | 15.13 | 18.72 |
| CDY17009 | Canola | nucleus | 15.87 | 18.7 |
| CDY02086 | Canola | nucleus | 16.61 | 18.59 |
| CDY54696 | Canola | nucleus | 16.24 | 18.49 |
| CDY23010 | Canola | nucleus | 16.61 | 18.22 |
| CDX67434 | Canola | nucleus | 28.41 | 18.2 |
| CDY01450 | Canola | nucleus | 14.76 | 18.18 |
| CDX74440 | Canola | nucleus | 28.41 | 18.16 |
| KRH74885 | Soybean | nucleus | 31.73 | 17.95 |
| KRH50577 | Soybean | nucleus | 31.73 | 17.95 |
| KRH70746 | Soybean | nucleus, plastid | 32.1 | 17.94 |
| GSMUA_Achr11P... | Banana | nucleus | 27.31 | 17.58 |
| CDY30261 | Canola | nucleus | 28.41 | 17.5 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 24.35 | 16.97 |
| CDX75689 | Canola | nucleus, plastid | 15.13 | 16.94 |
| KRG89621 | Soybean | nucleus | 29.89 | 16.8 |
| CDX69349 | Canola | nucleus, plastid | 14.76 | 16.53 |
| Os01t0264000-01 | Rice | nucleus | 27.31 | 14.92 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 25.09 | 14.62 |
| EES02731 | Sorghum | nucleus | 28.04 | 13.57 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 26.94 | 13.54 |
| Zm00001d040362_P001 | Maize | nucleus | 28.04 | 13.29 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 26.2 | 13.2 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 26.2 | 13.17 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IMU4 | UniProt:A0A078IMU4 | EnsemblPlants:CDY50734 | ProteinID:CDY50734 | ProteinID:CDY50734.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00097409001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | PANTHER:PTHR31089:SF14 | UniParc:UPI0004EE1408 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g50970DBnaC05g50970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMU4]
Coordinates
chrLK032935:+:44106..52520
Molecular Weight (calculated)
31362.0 Da
IEP (calculated)
8.958
GRAVY (calculated)
-0.775
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRGCICICI VVLKEIREPN PKTRSDKNEF EPIQTWHKYR MNLVLWYFGQ HKSEGSKETS ENSEITTTTT TTASEEKTTD DLKKPDKILP CPRCKSSDTK
101: FCYYNNYNVT QPRHFCRSCQ RYWTSGGSMR TVPVGSGQNK GWVSSDHYMH IKSENTNNYN DASAKILSFD SSGDESLVTE NGKNQSSDSI SKNFNNFQRF
201: LPPQVTSSVS RPWPYQYPHI PTFYHIPVYW GCTVPFWSTL QTYTCTHISQ HHIMHTHKKK KKTLLCLILG M
101: FCYYNNYNVT QPRHFCRSCQ RYWTSGGSMR TVPVGSGQNK GWVSSDHYMH IKSENTNNYN DASAKILSFD SSGDESLVTE NGKNQSSDSI SKNFNNFQRF
201: LPPQVTSSVS RPWPYQYPHI PTFYHIPVYW GCTVPFWSTL QTYTCTHISQ HHIMHTHKKK KKTLLCLILG M
001: MSSKIGMSQV RDTPVKLFGW TITPVSHDPY SSSSHVLPDS SSSSSSSSLS LRPHMMNNQS VTDNTSLKLS SNLNNESKET SENSDDQHSE ITTITSEEEK
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G26790]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.