Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014297.1-P | Field mustard | nucleus | 99.5 | 99.5 |
| CDY52953 | Canola | nucleus | 93.5 | 96.39 |
| CDY43923 | Canola | nucleus | 59.0 | 73.29 |
| CDX87836 | Canola | nucleus | 65.5 | 71.98 |
| CDY56923 | Canola | nucleus | 57.5 | 61.83 |
| CDY51457 | Canola | nucleus | 57.0 | 59.69 |
| CDY37299 | Canola | nucleus | 58.5 | 58.5 |
| CDY69021 | Canola | nucleus | 57.5 | 58.38 |
| CDY32420 | Canola | nucleus | 60.0 | 58.25 |
| CDY48879 | Canola | nucleus | 59.5 | 57.77 |
| GSMUA_Achr7P09590_001 | Banana | nucleus | 42.0 | 42.86 |
| GSMUA_Achr10P... | Banana | nucleus | 41.0 | 35.96 |
| GSMUA_Achr2P15700_001 | Banana | nucleus | 39.5 | 35.27 |
| GSMUA_Achr4P30860_001 | Banana | nucleus | 38.5 | 32.91 |
| CDY71347 | Canola | nucleus | 21.0 | 31.82 |
| CDY52832 | Canola | nucleus | 34.0 | 30.63 |
| CDY17783 | Canola | nucleus | 34.0 | 29.69 |
| CDY58082 | Canola | nucleus | 30.0 | 29.13 |
| CDY20892 | Canola | nucleus | 30.0 | 29.13 |
| CDY18628 | Canola | nucleus | 30.0 | 28.3 |
| CDY01450 | Canola | nucleus | 31.0 | 28.18 |
| CDY54696 | Canola | nucleus | 33.5 | 28.15 |
| CDY12790 | Canola | nucleus | 30.5 | 27.85 |
| CDY02086 | Canola | nucleus | 33.5 | 27.69 |
| CDX83127 | Canola | nucleus | 32.5 | 27.66 |
| CDY23010 | Canola | nucleus | 34.0 | 27.53 |
| CDX81350 | Canola | nucleus | 30.5 | 27.23 |
| CDY17009 | Canola | nucleus | 29.5 | 25.65 |
| CDX99791 | Canola | nucleus | 21.5 | 24.86 |
| CDY50789 | Canola | nucleus | 21.5 | 24.57 |
| CDY15647 | Canola | nucleus | 21.5 | 24.29 |
| CDX90171 | Canola | nucleus | 21.0 | 24.14 |
| CDY43321 | Canola | nucleus | 21.0 | 24.14 |
| CDY37670 | Canola | nucleus | 20.0 | 23.81 |
| CDY67393 | Canola | nucleus | 20.0 | 23.53 |
| CDX75689 | Canola | nucleus, plastid | 28.0 | 23.14 |
| CDX69349 | Canola | nucleus, plastid | 27.5 | 22.73 |
| CDY00286 | Canola | nucleus | 24.0 | 17.58 |
| CDY69084 | Canola | nucleus | 24.0 | 17.52 |
| CDY44994 | Canola | nucleus | 23.5 | 17.41 |
| CDY67518 | Canola | nucleus | 25.0 | 17.12 |
| CDY69244 | Canola | nucleus | 24.5 | 16.78 |
| CDY50734 | Canola | nucleus | 20.0 | 14.76 |
| CDY46443 | Canola | nucleus | 24.0 | 14.33 |
| CDY01768 | Canola | nucleus | 26.0 | 14.13 |
| CDX95919 | Canola | nucleus | 26.0 | 14.13 |
| CDY72477 | Canola | nucleus | 26.0 | 14.13 |
| CDY16193 | Canola | nucleus | 23.0 | 14.07 |
| CDY07344 | Canola | nucleus | 26.5 | 13.73 |
| CDY67869 | Canola | nucleus | 26.0 | 13.51 |
| CDY37010 | Canola | nucleus | 26.0 | 13.33 |
| CDY50735 | Canola | extracellular | 24.0 | 13.19 |
| CDX74440 | Canola | nucleus | 27.0 | 12.74 |
| CDX67434 | Canola | nucleus | 26.5 | 12.53 |
| CDY30261 | Canola | nucleus | 27.0 | 12.27 |
| CDY66672 | Canola | nucleus | 26.0 | 12.18 |
| CDY47405 | Canola | nucleus | 25.5 | 11.89 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IB66 | UniProt:A0A078IB66 | EnsemblPlants:CDY46544 | ProteinID:CDY46544 | ProteinID:CDY46544.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085759001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF60 | UniParc:UPI0004EDEE31 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g01830DBnaA08g01830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB66]
Coordinates
chrLK032675:-:75518..76351
Molecular Weight (calculated)
21989.7 Da
IEP (calculated)
9.370
GRAVY (calculated)
-0.864
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEDLTSAAA YYHHQSMIMT AKQQQQPELP EQEQLNCPRC ASPNTKFCYY NNYNLSQPRH FCKNCRRYWT KGGSLRNIPV GGGTRKNSSK RSSVGSSSSA
101: PSSSSPKSKT VAVSDQESRT TGNSGQEMDP TRMLYGLPVG DPSGGRFSSL LVSNMQQIRG VNYETGSGWY PGMELGLGSG IRRNDDAALT DLAMNRVEKN
101: PSSSSPKSKT VAVSDQESRT TGNSGQEMDP TRMLYGLPVG DPSGGRFSSL LVSNMQQIRG VNYETGSGWY PGMELGLGSG IRRNDDAALT DLAMNRVEKN
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
Arabidopsis Description
DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.