Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16193 | Canola | nucleus | 82.14 | 91.44 |
| CDY44994 | Canola | nucleus | 50.27 | 67.78 |
| AT1G26790.1 | Thale cress | nucleus, plastid | 66.76 | 65.32 |
| CDY50734 | Canola | nucleus | 48.63 | 65.31 |
| CDY46443 | Canola | nucleus | 59.07 | 64.18 |
| CDX95919 | Canola | nucleus | 50.27 | 49.73 |
| CDY01768 | Canola | nucleus | 50.0 | 49.46 |
| CDY72477 | Canola | nucleus | 50.0 | 49.46 |
| CDY07344 | Canola | nucleus | 51.92 | 48.96 |
| CDY67869 | Canola | nucleus | 51.65 | 48.83 |
| CDY69084 | Canola | nucleus | 30.49 | 40.51 |
| CDY00286 | Canola | nucleus | 30.22 | 40.29 |
| CDY71347 | Canola | nucleus | 14.29 | 39.39 |
| CDY69244 | Canola | nucleus | 31.04 | 38.7 |
| CDY67518 | Canola | nucleus | 30.77 | 38.36 |
| CDX90171 | Canola | nucleus | 17.86 | 37.36 |
| CDY43321 | Canola | nucleus | 17.86 | 37.36 |
| CDX99791 | Canola | nucleus | 17.03 | 35.84 |
| CDY50789 | Canola | nucleus | 17.03 | 35.43 |
| CDY15647 | Canola | nucleus | 16.76 | 34.46 |
| CDY67393 | Canola | nucleus | 15.66 | 33.53 |
| CDY37670 | Canola | nucleus | 15.38 | 33.33 |
| GSMUA_Achr5P07660_001 | Banana | nucleus | 26.1 | 31.46 |
| GSMUA_Achr9P05020_001 | Banana | nucleus | 28.02 | 31.1 |
| CDY43923 | Canola | nucleus | 12.36 | 27.95 |
| CDY66672 | Canola | nucleus | 31.87 | 27.17 |
| KRH50577 | Soybean | nucleus | 35.16 | 26.72 |
| CDY37010 | Canola | nucleus | 28.57 | 26.67 |
| CDY52832 | Canola | nucleus | 16.21 | 26.58 |
| CDY47405 | Canola | nucleus | 31.32 | 26.57 |
| KRH74885 | Soybean | nucleus | 34.89 | 26.51 |
| CDY56923 | Canola | nucleus | 13.46 | 26.34 |
| GSMUA_Achr6P32240_001 | Banana | nucleus | 28.02 | 26.22 |
| CDY17783 | Canola | nucleus | 16.48 | 26.2 |
| KRH70746 | Soybean | nucleus, plastid | 34.89 | 26.19 |
| CDX67434 | Canola | nucleus | 29.95 | 25.77 |
| CDY32420 | Canola | nucleus | 14.56 | 25.73 |
| CDY48879 | Canola | nucleus | 14.56 | 25.73 |
| KRG89621 | Soybean | nucleus | 34.07 | 25.73 |
| CDY51457 | Canola | nucleus | 13.46 | 25.65 |
| GSMUA_Achr11P... | Banana | nucleus | 29.67 | 25.65 |
| CDY37299 | Canola | nucleus | 14.01 | 25.5 |
| CDX74440 | Canola | nucleus | 29.67 | 25.47 |
| CDX83127 | Canola | nucleus | 16.21 | 25.11 |
| CDY69021 | Canola | nucleus | 13.46 | 24.87 |
| CDY54696 | Canola | nucleus | 16.21 | 24.79 |
| CDY18628 | Canola | nucleus | 14.29 | 24.53 |
| CDY02086 | Canola | nucleus | 16.21 | 24.38 |
| CDY30261 | Canola | nucleus | 29.4 | 24.32 |
| CDY52953 | Canola | nucleus | 12.91 | 24.23 |
| CDX87836 | Canola | nucleus | 12.09 | 24.18 |
| CDY46544 | Canola | nucleus | 13.19 | 24.0 |
| CDX81350 | Canola | nucleus | 14.56 | 23.66 |
| CDX75689 | Canola | nucleus, plastid | 15.66 | 23.55 |
| CDY23010 | Canola | nucleus | 15.93 | 23.48 |
| CDY20892 | Canola | nucleus | 13.19 | 23.3 |
| CDY58082 | Canola | nucleus | 13.19 | 23.3 |
| CDY01450 | Canola | nucleus | 14.01 | 23.18 |
| CDX69349 | Canola | nucleus, plastid | 15.38 | 23.14 |
| CDY12790 | Canola | nucleus | 13.46 | 22.37 |
| GSMUA_Achr2P11520_001 | Banana | nucleus | 26.92 | 21.08 |
| CDY17009 | Canola | nucleus | 12.64 | 20.0 |
| TraesCS3A01G180600.1 | Wheat | nucleus | 29.12 | 19.67 |
| TraesCS3B01G210300.1 | Wheat | nucleus | 29.12 | 19.67 |
| TraesCS3D01G185500.2 | Wheat | nucleus | 28.85 | 19.52 |
| EES02731 | Sorghum | nucleus | 29.4 | 19.11 |
| Zm00001d040362_P001 | Maize | nucleus | 29.4 | 18.71 |
| Os01t0264000-01 | Rice | nucleus | 24.73 | 18.15 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078II90 | UniProt:A0A078II90 | EnsemblPlants:CDY50735 | ProteinID:CDY50735 | ProteinID:CDY50735.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00097410001 | InterPro:IPR003851 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31089 | TMHMM:TMhelix |
| UniParc:UPI0004EF0BBC | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
BnaC05g50980DBnaC05g50980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078II90]
Coordinates
chrLK032935:+:59557..60771
Molecular Weight (calculated)
41502.1 Da
IEP (calculated)
6.987
GRAVY (calculated)
-0.763
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MSELRDTPVK LFGWTITSSL SSLVLVLKIK LNIFFFSVYH FETSFMMLMS NQSATDDIEQ DSTSLQRSSD LTEESKETSE NSEITTTTTT SEEKTTDDLK
101: KPDKILPCPR CNSSDTKFCY YNNYNVSQPR HFCRSCQRYW TSGGSMRTVP VGSGRRKNKG WVSSDNYMHI KSEDTNSYNS SPAKILSFDS SGEESLVTEN
201: DKNQSSDSVS KKFNKFQRFL PPQVTSSVSP PWPYQYPPNP AFYQIPVYWG CTVPFWSTLQ TCTCLGKRTR DEASHVSVGE NEDTSVRARL DSQSRSNTDE
301: ANVATKNRVF YPLPMEREKT HQFSLFVNGS ETKSGNNRFV PETYLNLQAN PEAMSRSMNF RESM
101: KPDKILPCPR CNSSDTKFCY YNNYNVSQPR HFCRSCQRYW TSGGSMRTVP VGSGRRKNKG WVSSDNYMHI KSEDTNSYNS SPAKILSFDS SGEESLVTEN
201: DKNQSSDSVS KKFNKFQRFL PPQVTSSVSP PWPYQYPPNP AFYQIPVYWG CTVPFWSTLQ TCTCLGKRTR DEASHVSVGE NEDTSVRARL DSQSRSNTDE
301: ANVATKNRVF YPLPMEREKT HQFSLFVNGS ETKSGNNRFV PETYLNLQAN PEAMSRSMNF RESM
001: MSSKIGMSQV RDTPVKLFGW TITPVSHDPY SSSSHVLPDS SSSSSSSSLS LRPHMMNNQS VTDNTSLKLS SNLNNESKET SENSDDQHSE ITTITSEEEK
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
101: TTELKKPDKI LPCPRCNSAD TKFCYYNNYN VNQPRHFCRK CQRYWTAGGS MRIVPVGSGR RKNKGWVSSD QYLHITSEDT DNYNSSSTKI LSFESSDSLV
201: TERPKHQSNE VKINAEPVSQ EPNNFQGLLP PQASPVSPPW PYQYPPNPSF YHMPVYWGCA IPVWSTLDTS TCLGKRTRDE TSHETVKESK NAFERTSLLL
301: ESQSIKNETS MATNNHVWYP VPMTREKTQE FSFFSNGAET KSSNNRFVPE TYLNLQANPA AMARSMNFRE SI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G26790]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.