Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012119.1-P | Field mustard | nucleus | 94.98 | 94.55 |
| CDY01450 | Canola | nucleus | 94.52 | 94.09 |
| CDY18628 | Canola | nucleus | 77.63 | 80.19 |
| CDX81350 | Canola | nucleus | 79.91 | 78.12 |
| AT5G66940.1 | Thale cress | nucleus | 77.63 | 75.56 |
| CDY17783 | Canola | nucleus | 57.08 | 54.59 |
| CDY02086 | Canola | nucleus | 60.27 | 54.55 |
| CDX83127 | Canola | nucleus | 57.99 | 54.04 |
| CDY54696 | Canola | nucleus | 57.99 | 53.36 |
| CDY52832 | Canola | nucleus | 53.42 | 52.7 |
| CDY23010 | Canola | nucleus | 57.53 | 51.01 |
| PGSC0003DMT400026137 | Potato | nucleus | 46.12 | 42.08 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 30.14 | 38.15 |
| Solyc02g090220.2.1 | Tomato | nucleus | 44.75 | 37.98 |
| CDY20892 | Canola | nucleus | 32.42 | 34.47 |
| CDY58082 | Canola | nucleus | 31.96 | 33.98 |
| CDY43923 | Canola | nucleus | 24.2 | 32.92 |
| CDY56923 | Canola | nucleus | 27.85 | 32.8 |
| CDX87836 | Canola | nucleus | 26.94 | 32.42 |
| CDY71347 | Canola | nucleus | 19.18 | 31.82 |
| CDY52953 | Canola | nucleus | 27.85 | 31.44 |
| CDY51457 | Canola | nucleus | 27.4 | 31.41 |
| CDY17009 | Canola | nucleus | 32.88 | 31.3 |
| CDY46544 | Canola | nucleus | 27.85 | 30.5 |
| CDY48879 | Canola | nucleus | 28.31 | 30.1 |
| CDY32420 | Canola | nucleus | 27.85 | 29.61 |
| CDY69021 | Canola | nucleus | 26.48 | 29.44 |
| CDY37299 | Canola | nucleus | 26.48 | 29.0 |
| KXG31638 | Sorghum | nucleus | 31.05 | 28.94 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 30.14 | 28.7 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 30.14 | 28.7 |
| Zm00001d039482_P001 | Maize | nucleus | 30.14 | 28.57 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 28.77 | 26.47 |
| CDX99791 | Canola | nucleus | 20.55 | 26.01 |
| CDY50789 | Canola | nucleus | 20.55 | 25.71 |
| CDY15647 | Canola | nucleus | 20.09 | 24.86 |
| CDY43321 | Canola | nucleus | 19.18 | 24.14 |
| CDX90171 | Canola | nucleus | 19.18 | 24.14 |
| CDY37670 | Canola | nucleus | 18.26 | 23.81 |
| CDY67393 | Canola | nucleus | 18.26 | 23.53 |
| CDX69349 | Canola | nucleus, plastid | 25.57 | 23.14 |
| CDX75689 | Canola | nucleus, plastid | 25.11 | 22.73 |
| CDY00286 | Canola | nucleus | 22.83 | 18.32 |
| CDY69244 | Canola | nucleus | 24.2 | 18.15 |
| CDY67518 | Canola | nucleus | 24.2 | 18.15 |
| CDY44994 | Canola | nucleus | 22.37 | 18.15 |
| CDY69084 | Canola | nucleus | 22.37 | 17.88 |
| CDY46443 | Canola | nucleus | 24.66 | 16.12 |
| CDY50734 | Canola | nucleus | 18.72 | 15.13 |
| CDY07344 | Canola | nucleus | 26.48 | 15.03 |
| CDY16193 | Canola | nucleus | 22.37 | 14.98 |
| CDX95919 | Canola | nucleus | 25.11 | 14.95 |
| CDY67869 | Canola | nucleus | 26.03 | 14.81 |
| CDY01768 | Canola | nucleus | 24.66 | 14.67 |
| CDY72477 | Canola | nucleus | 24.2 | 14.4 |
| CDY50735 | Canola | extracellular | 22.37 | 13.46 |
| CDY66672 | Canola | nucleus | 25.57 | 13.11 |
| CDY47405 | Canola | nucleus | 25.57 | 13.05 |
| CDX74440 | Canola | nucleus | 23.29 | 12.03 |
| CDY37010 | Canola | nucleus | 21.0 | 11.79 |
| CDY30261 | Canola | nucleus | 23.29 | 11.59 |
| CDX67434 | Canola | nucleus | 22.37 | 11.58 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078FEI8 | UniProt:A0A078FEI8 | EnsemblPlants:CDY12790 | ProteinID:CDY12790 | ProteinID:CDY12790.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00070399001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF12 | UniParc:UPI0004EBD853 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g16430DBnaC07g16430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEI8]
Coordinates
chrLK032027:-:78378..79037
Molecular Weight (calculated)
23220.9 Da
IEP (calculated)
9.257
GRAVY (calculated)
-0.421
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSDVNESRR LTKIPHGGAA ADQPDQLPCP RCESTNTKFC YYNNYNFSQP RHFCKACRRY WTHGGTLRDI PVGGVSRKSS KRSRTCSSVP VSTAVGSREF
101: PLQATPVLFP PSSNDGGVTA AKGTASSAFG GFTSLLSYNA AASRNGPGGR FNGLEGFGLG LGQGSYFDNV RFGQGITVWP FSTGATDATS AVTSHVGPIP
201: ATWQFEGPES KVGFVSGDY
101: PLQATPVLFP PSSNDGGVTA AKGTASSAFG GFTSLLSYNA AASRNGPGGR FNGLEGFGLG LGQGSYFDNV RFGQGITVWP FSTGATDATS AVTSHVGPIP
201: ATWQFEGPES KVGFVSGDY
001: MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
101: GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI
201: AQIPATWQFE GQESKVGFVS GDYVA
Arabidopsis Description
DOF5.8Dof zinc finger protein DOF5.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.