Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31638 | Sorghum | nucleus | 83.12 | 81.7 |
| TraesCS3D01G108600.1 | Wheat | nucleus | 50.65 | 50.87 |
| TraesCS3B01G125100.1 | Wheat | nucleus | 48.48 | 48.7 |
| TraesCS3A01G106500.1 | Wheat | nucleus | 49.78 | 48.32 |
| VIT_03s0063g01350.t01 | Wine grape | nucleus | 26.41 | 35.26 |
| VIT_07s0255g00020.t01 | Wine grape | nucleus | 32.47 | 34.09 |
| Solyc04g079570.1.1 | Tomato | nucleus | 34.2 | 33.05 |
| VIT_18s0001g11310.t01 | Wine grape | nucleus | 31.6 | 32.3 |
| PGSC0003DMT400030496 | Potato | nucleus | 27.27 | 32.14 |
| CDY18628 | Canola | nucleus | 29.0 | 31.6 |
| Bra037135.1-P | Field mustard | nucleus | 29.0 | 31.6 |
| Bra036082.1-P | Field mustard | nucleus | 29.87 | 31.08 |
| CDY52832 | Canola | nucleus | 29.87 | 31.08 |
| CDY20892 | Canola | nucleus | 27.71 | 31.07 |
| CDY58082 | Canola | nucleus | 27.71 | 31.07 |
| PGSC0003DMT400034111 | Potato | nucleus | 25.97 | 30.93 |
| CDX83127 | Canola | nucleus | 31.17 | 30.64 |
| Bra030010.1-P | Field mustard | nucleus | 31.17 | 30.64 |
| AT1G47655.1 | Thale cress | nucleus | 27.71 | 30.62 |
| CDY17783 | Canola | nucleus | 30.3 | 30.57 |
| CDY01450 | Canola | nucleus | 29.0 | 30.45 |
| PGSC0003DMT400026137 | Potato | nucleus | 31.6 | 30.42 |
| CDY23010 | Canola | nucleus | 32.47 | 30.36 |
| CDY54696 | Canola | nucleus | 31.17 | 30.25 |
| CDY02086 | Canola | nucleus | 31.6 | 30.17 |
| Bra012901.1-P | Field mustard | nucleus | 31.6 | 30.17 |
| CDY12790 | Canola | nucleus | 28.57 | 30.14 |
| Bra012119.1-P | Field mustard | nucleus | 28.57 | 30.0 |
| CDX81350 | Canola | nucleus | 29.0 | 29.91 |
| Bra015609.1-P | Field mustard | nucleus | 28.57 | 29.6 |
| Zm00001d001824_P001 | Maize | nucleus | 25.97 | 29.41 |
| AT3G50410.1 | Thale cress | nucleus | 32.03 | 29.25 |
| Solyc02g065290.1.1 | Tomato | nucleus | 25.11 | 28.57 |
| Solyc02g090220.2.1 | Tomato | nucleus | 31.6 | 28.29 |
| CDY17009 | Canola | nucleus | 28.14 | 28.26 |
| KRH70017 | Soybean | nucleus | 28.57 | 28.21 |
| AT5G66940.1 | Thale cress | nucleus | 27.27 | 28.0 |
| KRH08373 | Soybean | nucleus | 28.14 | 27.54 |
| Zm00001d026628_P001 | Maize | nucleus, plastid | 24.68 | 27.01 |
| Zm00001d012703_P001 | Maize | nucleus | 22.51 | 23.32 |
| Zm00001d010740_P001 | Maize | nucleus | 19.91 | 21.7 |
| Zm00001d031278_P001 | Maize | nucleus | 22.51 | 21.67 |
| Zm00001d038693_P001 | Maize | nucleus | 20.35 | 20.35 |
| Zm00001d043402_P001 | Maize | nucleus | 22.08 | 19.62 |
| Zm00001d005970_P001 | Maize | nucleus | 19.48 | 18.44 |
| Zm00001d043904_P001 | Maize | nucleus | 17.32 | 17.47 |
| Zm00001d020837_P001 | Maize | nucleus | 19.91 | 17.36 |
| Zm00001d024790_P001 | Maize | nucleus | 17.32 | 16.33 |
| Zm00001d033325_P001 | Maize | nucleus, plastid | 21.64 | 15.92 |
| Zm00001d013724_P001 | Maize | nucleus | 21.21 | 14.63 |
| Zm00001d014198_P001 | Maize | nucleus | 24.24 | 12.9 |
| Zm00001d032999_P001 | Maize | nucleus | 23.81 | 12.22 |
| Zm00001d027846_P001 | Maize | nucleus | 22.51 | 12.04 |
| Zm00001d022525_P001 | Maize | nucleus | 22.94 | 10.29 |
| Zm00001d040455_P001 | Maize | nucleus | 21.21 | 9.55 |
| Zm00001d040362_P001 | Maize | nucleus | 22.08 | 8.92 |
Protein Annotations
| EntrezGene:107325937 | MapMan:15.5.1.5 | UniProt:A0A060D5B9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 |
| EMBL:KJ727013 | ProteinID:ONM28946.1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF74 | UniParc:UPI0002213069 | EnsemblPlantsGene:Zm00001d039482 | EnsemblPlants:Zm00001d039482_P001 | EnsemblPlants:Zm00001d039482_T001 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
C2C2-Dof-transcription factor 7Dof zinc finger protein DOF1.6
Coordinates
chr3:-:5495949..5496644
Molecular Weight (calculated)
23663.2 Da
IEP (calculated)
10.014
GRAVY (calculated)
-0.225
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRSSAATEV GQVPDGRPLP APVATGGGGG GTGTGGGREP EGLPCPRCES ANTKFCYYNN YNLSQPRYFC RACRRYWTRG GALRNVPVGG GTRKATPAGR
101: RKRAGPAPAT AAPPAPPPPS ALHGSLLRPY GGLSFAAPAL ASPLAAVDPD RRLLDLGGSF TSLIAPGADV GVHFSAEFLV GGLAPAALPR ATASVPALPP
201: PPPQQHQQPT TVSQALPEGL FWSMGWPDLS I
101: RKRAGPAPAT AAPPAPPPPS ALHGSLLRPY GGLSFAAPAL ASPLAAVDPD RRLLDLGGSF TSLIAPGADV GVHFSAEFLV GGLAPAALPR ATASVPALPP
201: PPPQQHQQPT TVSQALPEGL FWSMGWPDLS I
001: MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
101: VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT
201: TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN SLK
Arabidopsis Description
DOF3.4OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.