Factsheet for Zm00001d013724_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024790_P001	Maize	nucleus	64.78	88.57
Zm00001d033325_P001	Maize	nucleus, plastid	72.24	77.07
EER91220	Sorghum	plastid	79.1	75.5
TraesCS4D01G080100.1	Wheat	nucleus	45.67	58.17
TraesCS4B01G081500.1	Wheat	nucleus	45.07	56.98
TraesCS4A01G234000.1	Wheat	nucleus	45.07	56.77
HORVU4Hr1G013890.1	Barley	nucleus	44.18	55.43
Zm00001d031278_P001	Maize	nucleus	22.99	32.08
GSMUA_Achr2P13350_001	Banana	nucleus	18.21	26.29
Zm00001d005970_P001	Maize	nucleus	18.51	25.41
Zm00001d020837_P001	Maize	nucleus	20.0	25.28
Zm00001d043904_P001	Maize	nucleus	16.72	24.45
Zm00001d001824_P001	Maize	nucleus	14.63	24.02
Zm00001d026628_P001	Maize	nucleus, plastid	14.93	23.7
Zm00001d010740_P001	Maize	nucleus	14.33	22.64
Zm00001d012703_P001	Maize	nucleus	14.63	21.97
Zm00001d039482_P001	Maize	nucleus	14.63	21.21
Zm00001d038693_P001	Maize	nucleus	14.33	20.78
Zm00001d043402_P001	Maize	nucleus	13.43	17.31
Zm00001d027846_P001	Maize	nucleus	19.1	14.81
Zm00001d032999_P001	Maize	nucleus	17.91	13.33
Zm00001d040455_P001	Maize	nucleus	19.4	12.67
Zm00001d014198_P001	Maize	nucleus	16.12	12.44
Zm00001d040362_P001	Maize	nucleus	19.1	11.19
Zm00001d022525_P001	Maize	nucleus	15.82	10.29

Protein Annotations

EntrezGene:103626052	MapMan:15.5.1.5	UniProt:A0A1D6GLQ1	ProteinID:AQK64239.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992
PANTHER:PTHR31992:SF81	UniParc:UPI000220CD80	EnsemblPlantsGene:Zm00001d013724	EnsemblPlants:Zm00001d013724_P001	EnsemblPlants:Zm00001d013724_T001	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

C2C2-Dof-transcription factor 26Dof zinc finger protein DOF1.6

Coordinates

chr5:+:18617764..18618771

Molecular Weight (calculated)

33817.9 Da

IEP (calculated)

9.129

GRAVY (calculated)

-0.229

Length

335 amino acids

Sequence
(BLAST)

001: MASQAQAARL QPPTMAPFAP LPHNACKHDA VRHHLNTMAA TWCGSTNNNV TATGAMAAAT SGSTSNSNAA PGGGATDMAA YLQQLQDAAA AKSSGGGGAT
101: RGEQCPRCAS HDTKFCYYNN YNTSQPRHFC RACRRYWTLG GSLRNVPIGG STRKRPRLAH PHPQQHARRA PAAHVFGLGL GIGGVAPPPP PPMMLPSSST
201: SSPPSQGQGG GGLLGSLFAL GAAGPLLEGR GAGSSFDFDF DLGLGLPTGP LHLGAGEAAA AQMQGLGLRG GGPAAGSSAF LWPAGAGMLV DNDSVDTWKL
301: PGTSAGSMWP DFSSLAAAAP QTGGLMHGGA HAHLM

Best Arabidopsis Sequence Match ( AT1G28310.1 )
(BLAST)

001: MQSKNMIVAS SHQQQQQQQP QQPQPQLKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGSYRKNK RVKRPSTATT TTASTVSTTN
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I

Arabidopsis Description

Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.