Factsheet for Zm00001d043402_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33408	Sorghum	nucleus	83.08	83.08
Zm00001d012703_P001	Maize	nucleus	70.38	82.06
TraesCS3A01G306800.1	Wheat	nucleus	52.31	67.33
TraesCS3B01G329700.1	Wheat	nucleus	51.92	66.18
TraesCS3D01G295100.1	Wheat	nucleus	50.77	66.0
HORVU3Hr1G072970.1	Barley	nucleus	50.77	65.35
Os01t0758200-01	Rice	nucleus	52.31	64.45
GSMUA_Achr2P09110_001	Banana	nucleus	24.23	52.94
GSMUA_Achr4P08020_001	Banana	nucleus	28.85	49.67
GSMUA_Achr4P15140_001	Banana	nucleus	28.08	48.99
GSMUA_Achr9P06430_001	Banana	nucleus	26.92	45.45
Zm00001d010740_P001	Maize	nucleus	34.23	41.98
Zm00001d038693_P001	Maize	nucleus	35.0	39.39
Zm00001d026628_P001	Maize	nucleus, plastid	18.46	22.75
Zm00001d043904_P001	Maize	nucleus	20.0	22.71
Zm00001d039482_P001	Maize	nucleus	19.62	22.08
Zm00001d001824_P001	Maize	nucleus	17.31	22.06
Zm00001d031278_P001	Maize	nucleus	17.31	18.75
Zm00001d020837_P001	Maize	nucleus	18.85	18.49
Zm00001d005970_P001	Maize	nucleus	17.31	18.44
Zm00001d033325_P001	Maize	nucleus, plastid	18.85	15.61
Zm00001d032999_P001	Maize	nucleus	26.54	15.33
Zm00001d027846_P001	Maize	nucleus	24.62	14.81
Zm00001d014198_P001	Maize	nucleus	23.85	14.29
Zm00001d024790_P001	Maize	nucleus	13.46	14.29
Zm00001d013724_P001	Maize	nucleus	17.31	13.43
Zm00001d040362_P001	Maize	nucleus	28.08	12.76
Zm00001d022525_P001	Maize	nucleus	25.0	12.62
Zm00001d040455_P001	Maize	nucleus	24.62	12.48

Protein Annotations

EntrezGene:103651189	MapMan:15.5.1.5	UniProt:A0A060D5A5	ProteinID:AIB04489.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	ProteinID:ONM37762.1	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31089	PANTHER:PTHR31089:SF14	UniParc:UPI000221B7C7	EnsemblPlantsGene:Zm00001d043402	EnsemblPlants:Zm00001d043402_P001	EnsemblPlants:Zm00001d043402_T001
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

C2C2-Dof-transcription factor 37Dof zinc finger protein DOF1.5

Coordinates

chr3:+:198907070..198907852

Molecular Weight (calculated)

28013.5 Da

IEP (calculated)

8.915

GRAVY (calculated)

-0.799

Length

260 amino acids

Sequence
(BLAST)

001: MLSHVEMAPG GFKLFGKVIT QCAESAPPAP PEAAAAASRA TAFARERDDP DERDQPMVKR EAAASDHDFA AVDKHHQHSG GSGGPGPGPD ESDDSKGQQQ
101: QQHHPRPRHH QHHHQQQQDT VEARAAAAAS SAPPLPCPRC RSRNTKFCYF NNYNVNQPRH FCKDCHRYWT AGGALRNVPV GAGRRKNRPL GPVVAGAVPV
201: PVPVPAHHHH HHLHPAAAAA AAAAGFVLGF PGQQHPSSPT SPSPSPVYAD RWPVCPDRRF

Best Arabidopsis Sequence Match ( AT2G34140.1 )
(BLAST)

001: MATQDSQGIK LFGKTIAFNT RTIKNEEETH PPEQEATIAV RSSSSSDLTA EKRPDKIIAC PRCKSMETKF CYFNNYNVNQ PRHFCKGCHR YWTAGGALRN
101: VPVGAGRRKS KPPGRVVVGM LGDGNGVRQV ELINGLLVEE WQHAAAAAHG SFRHDFPMKR LRCYSDGQSC

Arabidopsis Description

CDF4Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.